| QTL Map Information |
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| Chromosome: | 9 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81413998 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
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P_values | <0.05 | | Dominance effect: | 0.048 |
| Additive effect: | −1.350 |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Pigs were from a multi-generation Yorkshire-Landrace-Duroc resource population. |
| Breeds associated:
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| Design: | Animals were genotyped with a combination of five commercial SNP arrays (Illumina Porcine SNP60.v1 or SNP60.v2 BeadChip, Neogen Porcine GGP, Neogen SNP50, and Neogen Porcine GGPHD), with data imputed to the combined SNP set. GWAS was performed for age at puberty in gilts. |
| Analysis: | GWAS was conducted using the gBLUP approach. |
| Software: | SNP and Variation Suite v8.9.0, JMP version Pro 15.0.0 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Wijesena HR, Nonneman DJ, Snelling WM, Rohrer GA, Keel BN, Lents CA |
| Affiliation: | Livestock Bio-systems Research Unit, Clay Center, NE, USA |
| Title: | gBLUP-GWAS identifies candidate genes, signaling pathways, and putative functional polymorphisms for age at puberty in gilts |
| Journal: | Journal of animal science, 2023, 101:skad063 |
| Links: |
PubMed | Abstract | List all data
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