| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 46.84 (cM) |
| QTL Span: | 46.84-46.84 (cM)
97.1-97.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80948642 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | SH3BGRL2 (SH3 domain binding glutamic acid-rich protein like 2) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from a resource population derived from Piau grandsires and granddams from a commercial line composed of Large White, Landrace, and Pietrain. |
| Breeds associated:
|
| Design: | Animals were genotyped using a custom SNP chip containing 384 markers and analyzed for teat number. A total of 237 SNPs were used for analysis. |
| Analysis: | Regression models were used. |
| Software: | R software |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Verardo L L, Silva F F, Varona L, Resende M D V, Bastiaansen J W M, Lopes P S, Guimarães S E F |
| Affiliation: | Department of Animal Science, Universidade Federal de Viçosa - UFV, Viçosa, MG, Brazil |
| Title: | Bayesian GWAS and network analysis revealed new candidate genes for number of teats in pigs |
| Journal: | Journal of applied genetics, 2014, 56(1):123-32 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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