| QTL Map Information |
|---|
| Chromosome: | 13 |
| QTL Peak Location: | 85.40 (cM) |
| QTL Span: | 85.40-85.40 (cM)
134.2-134.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80937492 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.00102 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | MUC4 (mucin 4, cell surface associated) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Pigs were of various breeds: Large White, Belgian Landrace, Large White x Belgian Landrace, Large White x Pietrain, and crossbreds of multiple breeds. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for F4ab/ac receptor positive status. A total of 55,289 SNPs, plus one each in MUC4 and MUC13, were used for analysis. |
| Analysis: | The Cochran-Mantel-Haenszel test was used. |
| Software: | Haploview, PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Goetstouwers T, Van Poucke M, Coppieters W, Nguyen VU, Melkebeek V, Coddens A, Van Steendam K, Deforce D, Cox E, Peelman L J |
| Affiliation: | Laboratory of Animal Genetics, Faculty of Veterinary Medicine, Ghent University, Belgium |
| Title: | Refined candidate region for F4ab/ac enterotoxigenic Escherichia coli susceptibility situated proximal to MUC13 in pigs |
| Journal: | PloS one, 2014, 9(8): e105013 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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