Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 594 Description:

 Trait Information
Trait name: Teat number Vertebrate Trait Ontology: Nipple quantity
Reported name: Teat number Product Trait Ontology: n/a
Symbol: TNUM Clinical Measurement Ontology: Teat number
 QTL Map Information
Chromosome:10
QTL Peak Location:86.3 (cM)
QTL Span:67.5-101 (cM)
41.3-61.2 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":SW1041
Peak:SW920
Lower, "Significant":SW951
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:n/a
Test base:n/a
Threshold significance level:n/a
F_Stat17.14
P_values< 0.001
Dominance effect:-0.134
Additive effect:0.35
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #594
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  •  QTL Experiment in Brief
    Animals:Three generation population from crossbreds between Meishan and Dutch lines. Randomly selected F1 were mated to produce F2 population.
     Breeds associated:
    n/a
    Design:A whole-genome scan was conducted using 132 microsatellite markers to identify chromo-somal regions that have an effect on teat number. were imprinted.
    Analysis:The QTL analyses were based on the line-cross concept (Haley et al., 1994).--test new
    Software:CRIMAP 2.4; Haley's QTLprogram.
    Notes: 
    Links:Edit

     Reference
    Authors:Hirooka H, de Koning DJ, Harlizius B, van Arendonk JA, Rattink AP, Groenen MA,Brascamp EW, Bovenhuis H.
    Affiliation:Faculty of Economics, Ryukoku University, Kyoto, Japan.
    Title:A whole-genome scan for quantitative trait loci affecting teat number in pigs.
    Journal:J Anim Sci, 2001, Sep;79(9):2320-6.
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #11583418
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  • Cite this Data:

    Animal QTLdb: QTL594 was published in 2001, and was curated into QTLdb on 2003-12-20. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:594

     

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