Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 6347 Description:

 Trait Information
Trait name: Alkaline phosphatase activity Vertebrate Trait Ontology: n/a
Reported name: Alkaline phosphatase activity Product Trait Ontology: n/a
Symbol: ALPA Clinical Measurement Ontology: Serum alkaline phosphatase activity level
 QTL Map Information
Chromosome:6
QTL Peak Location:87.34 (cM)
QTL Span:68.7-110.4 (cM)
34.5-129.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":SW492
Peak:
Lower, "Significant":SW824
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:Mendelian
Test base:Chromosome-wise
Threshold significance level:Significant
F_Stat6.72
VARIANCE11.21
P_values<0.05
Dominance effect:-72.49
Additive effect:52.50
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #6347
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  •  QTL Experiment in Brief
    Animals:Animals were a Meishan x Pietrain cross.
     Breeds associated:
    Design:Animals were genotyped for 101 microsatellite markers and analyzed for serum clinical-chemical traits before and after challenge with the protozoan parasite Sarcocystis miescheriana.
    Analysis:A least-squares regression model was used.
    Software:SPSS, QTL Express
    Notes: 
    Links:Edit

     Reference
    Authors:Reiner, G; Clemens, N; Fischer, R; Kohler, F; Berge, T; Hepp, S; Willems, H
    Affiliation:Department of Veterinary Clinical Sciences, University of Giessen, D-35392 Giessen, Germany
    Title:Mapping of quantitative trait loci for clinical-chemical traits in swine.
    Journal:Animal genetics, 2008, 40 (1): 57-64
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:Prior to challenge with protozoan parasite Sarcocystis miescheriana
    User inputs on reference #19016680
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  • Cite this Data:

    Animal QTLdb: QTL6347 was published in 2008, and was curated into QTLdb on 2009-07-24. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:6347

     

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