Release 56
(Apr 24, 2025)

QTL 65394 Description:

 Trait Information
Trait name: Intramuscular fat content Vertebrate Trait Ontology: Intramuscular adipose amount
Reported name: (n/a) Product Trait Ontology: Intramuscular fat content
Symbol: IMF Clinical Measurement Ontology: Intramuscular fat morphological measurement
 QTL Map Information
Chromosome:4
QTL Peak Location:1.24 (cM)
QTL Span:1.24-1.24 (cM)
1.3-1.3 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.041
Dominance effect:n/a
Additive effect:n/a
Associated Gene:GPIHBP1 (glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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    •  QTL Experiment in Brief
    Animals:Animals were Yanan pigs.
     Breeds associated:
    n/a
    Design:Animals were genotyped for 36 SNPs in GPIHBP1 and analyzed for fatness traits.
    Analysis:The general linear model procedure was used.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Xu H, Tao X, Wei Yingying, Chen J, Xing S, Cen W, Wen A, Zhu L, Tang G, Li M, Jiang A, Jiang Y, Li X
    Affiliation:College of Animal Science and Technology, Sichuan Agricultural University, Ya'an City 625014, China
    Title:Cloning of porcine GPIHBP1 gene and its tissue expression pattern and genetic effect on adipose traits
    Journal:Gene, 2015, 557(2): 146-53
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #25498336
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    • Cite this Data:

    Animal QTLdb: QTL65394 was published in 2015, and was curated into QTLdb on 2016-01-12. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:65394

     

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