| QTL Map Information |
|---|
| Chromosome: | 9 |
| QTL Peak Location: | 31.5 (cM) |
| QTL Span: | 17.56-17.81 (cM)
13.5-13.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | -26.77 |
| Associated Gene: | PIWIL4 (piwi-like RNA-mediated gene silencing 4) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Duroc, Landrace, and Large White pigs. |
| Breeds associated:
|
| Design: | Following gene expression analysis and functional enrichment analysis, genes potentially involved in spermatogenesis and sexual maturity were identified. Animals were genotyped for two SNPs in PIWIL4 and analyzed for semen quality traits. |
| Analysis: | The general linear model procedure was used. |
| Software: | R software, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Song H, Zhu L, Li Y, Ma C, Guan K, Xia X, Li F |
| Affiliation: | Key Laboratory of Pig Genetics and Breeding of Ministry of Agriculture & Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction of Ministry of Education, Huazhong Agricultural University, Wuhan 430070, PR China |
| Title: | Exploiting RNA-sequencing data from the porcine testes to identify the key genes involved in spermatogenesis in Large White pigs |
| Journal: | Gene, 2015, 573(2): 303-9 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | g.572T>C |
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