Release 56
(Apr 24, 2025)

QTL 8647 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: last rib back fat thickness Product Trait Ontology: n/a
Symbol: LRIBF Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:13
QTL Peak Location:33.4 (cM)
QTL Span:11.71-12.00 (cM)
7.3-7.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:-
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:XIRP1 (xin actin-binding repeat containing 1)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals used included Tongcheng, Swedish Landrace, Yorkshire, Landrace x Tongcheng, and Yorkshire x Tongcheng.
     Breeds associated:
    n/a
    Design:Animals were genotyped for 2 SNPs in CMYA1 and analyzed for 19 traits.
    Analysis:Associations were analyzed using a linear model.
    Software:SAS, CRIMAP
    Notes: 
    Links:Edit

     Reference
    Authors:Xu, X L; Xu, X W; Pan, P W; Li, K; Jiang, Z H; Yu, M; Rothschild, M F; Liu, B
    Affiliation:Lab of Molecular Biology and Animal Breeding, Key Laboratory of agricultural Animal Genetics, Breeding, and Reproduction of Ministry of Education & Key Laboratory of Swine Genetics and Breeding of Ministry of Agriculture, Huazhong Ag
    Title:Porcine skeletal muscle differentially expressed gene CMYA1: isolation, characterization, mapping, expression and association analysis with carcass traits.
    Journal:Animal genetics, 2009, 40 (3): 255-61
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #19170674
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  • Cite this Data:

    Animal QTLdb: QTL8647 was published in 2009, and was curated into QTLdb on 2012-07-31. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:8647

     

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