| QTL Map Information |
|---|
| Chromosome: | 14 |
| QTL Peak Location: | 85.89 (cM) |
| QTL Span: | 85.70-86.07 (cM)
111.5-111.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80861887 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.01 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | LOC100623762 (transmembrane protein 132B) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #95460
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Suzhong sows grouped based on high or low variability in litter birth weight. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for SNP association with birth weight variability (standard deviation). A total of 53,693 SNPs were used for analysis. |
| Analysis: | A compressed mixed linear model was used. |
| Software: | PLINK, GAPIT |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Wang X, Liu X, Deng D, Yu M, Li X |
| Affiliation: | Key Laboratory of Agricultural Animal Genetics, Breeding, and Reproduction of Ministry of Education, Huazhong Agricultural University, Wuhan, 430070, China |
| Title: | Genetic determinants of pig birth weight variability |
| Journal: | BMC genetics, 2016, 17 Suppl 1: 15 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #26822294
Add your comments
Note similar findings
Note contradictions
|
