Annotation of TIGR Porcine Gene Index (SsGI) with Human UniGene Info
We developed this web interface to facilitate the use of the
Pig Array. Users can either
search our results (option 1) or blast his/her own sequences (option 2)
for annotation. Users can cite our work as "NAGRP BioInfo Team: Annotation
of TIGR Porcine Gene Index (SsGI) with Human UniGene Info. http://www.genome.iastate.edu/resources/array_annotat.html, November 2003."
Users can search / download our preliminary sequence annotation results
(by blast TIGR Porcine Gene Index, SsGI versoin 5, against human UniGene,
Build #163). The Geneontology (GO) annotation by TIGR is also included.
Please note that if you don't input any search keywords
and leave the choices as they are, clicking the "submit" botton will download
the list of sequences on the (Qiagen) PigArray.
Users can blast his/her own sequence(s) to get the closest match of human
UniGene for annotation. The output will list:
- Human UniGene name.
- Human Unigene map location;
- Human tissue where the gene was found to have expressed in.
DOC: The database setup