A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
XAB2   ENSSSCG00000013582 2:51151464-51160850   CU929919,CH242-334A8,2:51145935-51174431
(Clone quality: bE334A8 on chr=2; Num_of_Contigs=7; )
XAF1 ENSSSCG00000017887 12:47891728-47906576   CU655858,CH242-208J3,12:47772347-47942311
(Clone quality: bE208J3 on chr=12; Num_of_Contigs=1; )
XBP1 ENSSSCG00000009970 14:46573585-46573803   CU468554,CH242-147E1,14:46568987-46573805
(Clone quality: bE147E1 on chr=14; Num_of_Contigs=18; )
XBP1 location ⇒ 14:46573805-46573009   CU468554,CH242-147E1,14:46568987-46573805
(Clone quality: bE147E1 on chr=14; Num_of_Contigs=18; )
XCL1 ENSSSCG00000006298 4:85731913-85735415   CU468871,CH242-234H3,4:85619645-85796249
(Clone quality: bE234H3 on chr=4; Num_of_Contigs=1; )
XCL1 location ⇒ 4:85730783-85730840   CU468871,CH242-234H3,4:85619645-85796249
(Clone quality: bE234H3 on chr=4; Num_of_Contigs=1; )
XCL1 location ⇒ 4:85732260-85731996   CU468871,CH242-234H3,4:85619645-85796249
(Clone quality: bE234H3 on chr=4; Num_of_Contigs=1; )
XCL1 location ⇒ 4:85733267-85733151   CU468871,CH242-234H3,4:85619645-85796249
(Clone quality: bE234H3 on chr=4; Num_of_Contigs=1; )
XCL1 location ⇒ 4:85735415-85735336   CU468871,CH242-234H3,4:85619645-85796249
(Clone quality: bE234H3 on chr=4; Num_of_Contigs=1; )
XCR1 ENSSSCG00000011319 13:24564825-24565826   CU914332,CH242-66E24,13:24531631-24590696
(Clone quality: bE66E24 on chr=13; Num_of_Contigs=2; )
XCR1 location ⇒ 13:10773358-10773435   CU582776,CH242-317M7,13:10771906-10776634
(Clone quality: bE317M7 on chr=13; Num_of_Contigs=16; )
XCR1 location ⇒ 13:19533087-19533168   CU928576,CH242-472I4,13:19524974-19540885
(Clone quality: bE472I4 on chr=13; Num_of_Contigs=20; )
XCR1 location ⇒ 13:20498214-20498137   CU915326,CH242-250M9,13:20486506-20506417
(Clone quality: bE250M9 on chr=13; Num_of_Contigs=6; )
XCR1 location ⇒ 13:7223397-7223478   CU466415,CH242-65F3,13:7204813-7268036
(Clone quality: bE65F3 on chr=13; Num_of_Contigs=3; )
XDH   ENSSSCG00000008522 3:101265909-101330650   CU928283,CH242-163G15,3:101254359-101343815
(Clone quality: bE163G15 on chr=3; Num_of_Contigs=6; )
XIAP ENSSSCG00000017887 12:47891728-47906576   CU655858,CH242-208J3,12:47772347-47942311
(Clone quality: bE208J3 on chr=12; Num_of_Contigs=1; )
XIAP ENSSSCG00000012641 X:99194417-99194632   CU463995,CH242-82J8,X:99189489-99242893
(Clone quality: bE82J8 on chr=X; Num_of_Contigs=8; )
XIAP location ⇒ X:99194440-99195712   CU463995,CH242-82J8,X:99189489-99242893
(Clone quality: bE82J8 on chr=X; Num_of_Contigs=8; )
XIRP1   ENSSSCG00000011265 13:19793817-19799336   CU856480,CH242-203F12,13:19771204-19801807
(Clone quality: bE203F12 on chr=13; Num_of_Contigs=3; )
XK   ENSSSCG00000012228 X:32998805-33053762   FP015856,CH242-13J4,X:32972003-33096809
(Clone quality: bE13J4 on chr=X; Num_of_Contigs=7; )
XKR4   ENSSSCG00000006254 4:79257876-79258709 CU179679,CH242-296A6,4:79245516-79435891
(Clone quality: bE296A6 on chr=4; Num_of_Contigs=3; ) 		 
XKR5   ENSSSCG00000015756 15:34967084-34982329    
XKR6   ENSSSCG00000009693 14:14284696-14311503    
XKR7   ENSSSCG00000007238 17:37676969-37702503    
XKR8   ENSSSCG00000003581 6:58517925-58525194   CU928393,CH242-274K17,6:58465404-58557237
(Clone quality: bE274K17 on chr=6; Num_of_Contigs=5; )
XKR9   ENSSSCG00000006191 4:66816316-66837667   CU469060,CH242-76J16,4:66813509-66916821
(Clone quality: bE76J16 on chr=4; Num_of_Contigs=2; )
XKRX   ENSSSCG00000012487 X:75952370-75966104   FP015894,CH242-19K5,X:75928516-76058542
(Clone quality: bE19K5 on chr=X; Num_of_Contigs=2; )
XPA   ENSSSCG00000005368 1:251040445-251103123    
XPC   ENSSSCG00000011602 13:58553526-58601689   CU633560,CH242-223L17,13:58523231-58606594
(Clone quality: bE223L17 on chr=13; Num_of_Contigs=4; )
XPNPEP1   ENSSSCG00000010620 14:125875205-125971326    
XPNPEP2 ENSSSCG00000012651 X:104479369-104501139   CU856556,CH242-148P15,X:104475247-104501866
(Clone quality: bE148P15 on chr=X; Num_of_Contigs=17; )
XPNPEP2 location ⇒ X:104479946-104478692   CU856556,CH242-148P15,X:104475247-104501866
(Clone quality: bE148P15 on chr=X; Num_of_Contigs=17; )
XPNPEP2 location ⇒ X:104491958-104491759   CU856556,CH242-148P15,X:104475247-104501866
(Clone quality: bE148P15 on chr=X; Num_of_Contigs=17; )
XPNPEP2 location ⇒ X:104496617-104496469   CU856556,CH242-148P15,X:104475247-104501866
(Clone quality: bE148P15 on chr=X; Num_of_Contigs=17; )
XPNPEP2 location ⇒ X:104583105-104583351   CU856556,CH242-148P15,X:104577022-104587269
(Clone quality: bE148P15 on chr=X; Num_of_Contigs=17; )
XPNPEP3   ENSSSCG00000000069 5:3832731-3846180   CU633651,CH242-197C11,5:3822050-3867689
(Clone quality: bE197C11 on chr=5; Num_of_Contigs=3; )
XPO1 ENSSSCG00000008381 3:73927249-73936986    
XPO1 location ⇒ 3:73875862-73876345   CU928836,CH242-70H11,3:73867433-73876364
(Clone quality: bE70H11 on chr=3; Num_of_Contigs=7; )
XPO1 location ⇒ 3:73927242-73927374   CU928836,CH242-70H11,3:73924368-73928292
(Clone quality: bE70H11 on chr=3; Num_of_Contigs=7; )
XPO1 location ⇒ 3:73933263-73933366   CU928836,CH242-70H11,3:73928393-73938196
(Clone quality: bE70H11 on chr=3; Num_of_Contigs=7; )
XPO1 location ⇒ 3:73936903-73936973   CU928836,CH242-70H11,3:73928393-73938196
(Clone quality: bE70H11 on chr=3; Num_of_Contigs=7; )
XPO4   ENSSSCG00000009276 11:303454-362150    
XPO6   ENSSSCG00000007812 3:16955711-17027672    
XPO7   ENSSSCG00000009611 14:6183238-6222522   CT737273,CH242-75B21,14:6134462-6252305
(Clone quality: bE75B21 on chr=14; Num_of_Contigs=4; )
XPOT   ENSSSCG00000000466 5:28767453-28790449   CU855647,CH242-276J18,5:28765932-28792261
(Clone quality: bE276J18 on chr=5; Num_of_Contigs=6; )
XPR1   ENSSSCG00000015537 9:114744644-114841518    
XRCC1 ENSSSCG00000003055 6:34904506-34926450    
XRCC1 location ⇒ 6:34913138-34912977   FP102604,CH242-184P4,6:34894721-34923339
(No clone quality info on )
XRCC1 location ⇒ 6:34918793-34918678   FP102604,CH242-184P4,6:34894721-34923339
(No clone quality info on )
Go to records:
1-49, 50-26

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Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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