A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
YAP1 ENSSSCG00000014981 9:32592257-32707172    
YAP1 location ⇒ 9:32592371-32592256   CU928730,CH242-333H6,9:32590673-32604587
(Clone quality: bE333H6 on chr=9; Num_of_Contigs=7; )
YAP1 location ⇒ 9:32613414-32613297   CU928730,CH242-333H6,9:32604688-32638704
(Clone quality: bE333H6 on chr=9; Num_of_Contigs=7; )
YAP1 location ⇒ 9:32687785-32687968   CU928730,CH242-333H6,9:32683158-32699868
(Clone quality: bE333H6 on chr=9; Num_of_Contigs=7; )
YAP1 location ⇒ 9:32707174-32706922   CU928730,CH242-333H6,9:32702750-32708595
(Clone quality: bE333H6 on chr=9; Num_of_Contigs=7; )
YBX2   ENSSSCG00000017938 12:49767108-49772328    
YDJC   ENSSSCG00000010087 14:51334545-51336293   CU633431,CH242-79C11,14:51180713-51414471
(Clone quality: bE79C11 on chr=14; Num_of_Contigs=4; )
YEATS2   ENSSSCG00000011776 13:92107683-92213773    
YEATS4   ENSSSCG00000000491 5:32484074-32488974   CU469188,CH242-167B23,5:32482589-32489083
(Clone quality: bE167B23 on chr=5; Num_of_Contigs=22; )
YIF1A   ENSSSCG00000012953 2:4475173-4479363   CU462998,CH242-142J19,2:4472554-4485664
(Clone quality: bE142J19 on chr=2; Num_of_Contigs=8; )
YIF1B   ENSSSCG00000002952 6:32405361-32416053    
YIPF2   ENSSSCG00000013634 2:52770182-52775125   CU928849,CH242-1G23,2:52764937-52777072
(Clone quality: bE1G23 on chr=2; Num_of_Contigs=8; )
YIPF3 ENSSSCG00000001686 7:44849276-44854088   CU928765,CH242-349L1,7:44817320-44863152
(Clone quality: bE349L1 on chr=7; Num_of_Contigs=5; )
YIPF4   ENSSSCG00000008519 3:101095070-101109076    
YIPF6   ENSSSCG00000012829 X:124156625-124178404   FP102825,CH242-246D14,X:124123832-124199134
(Clone quality: bE246D14 on chr=X; Num_of_Contigs=7; )
YIPF7   ENSSSCG00000008806 8:29992020-30017706    
YKT6   ENSSSCG00000016750 18:49503730-49514029   CU896551,CH242-145I13,18:49497243-49523263
(Clone quality: bE145I13 on chr=18; Num_of_Contigs=8; )
YLPM1   ENSSSCG00000002372 7:106229755-106295921    
YME1L1   ENSSSCG00000011066 10:47116898-47155537    
YOD1   ENSSSCG00000015659 9:132207651-132211375   CU694720,CH242-352B19,9:132198917-132230433
(Clone quality: bE352B19 on chr=9; Num_of_Contigs=11; )
YPEL1   ENSSSCG00000010082 14:51264367-51280167   CU633431,CH242-79C11,14:51180713-51414471
(Clone quality: bE79C11 on chr=14; Num_of_Contigs=4; )
YPEL4   ENSSSCG00000013180 2:11294609-11298941   CU914175,CH242-140O21,2:11248278-11317852
(Clone quality: bE140O21 on chr=2; Num_of_Contigs=3; )
YPEL5   ENSSSCG00000008529 3:102455445-102473065    
YSK4   ENSSSCG00000015696 15:15195030-15233168    
YTHDC2   ENSSSCG00000014211 2:106714465-106760300   CU462841,CH242-82A13,2:106714405-106892967
(Clone quality: bE82A13 on chr=2; Num_of_Contigs=1; )
YTHDF3   ENSSSCG00000006226 4:73604508-73605850    
YWHAB ENSSSCG00000007381 17:49104967-49126235   CU633343,CH242-147P9,17:49046271-49162684
(Clone quality: bE147P9 on chr=17; Num_of_Contigs=3; )
YWHAB location ⇒ 17:49119246-49119550   CU633343,CH242-147P9,17:49046271-49162684
(Clone quality: bE147P9 on chr=17; Num_of_Contigs=3; )
YWHAB location ⇒ 17:49121721-49121845   CU633343,CH242-147P9,17:49046271-49162684
(Clone quality: bE147P9 on chr=17; Num_of_Contigs=3; )
YWHAB location ⇒ 17:49123182-49123346   CU633343,CH242-147P9,17:49046271-49162684
(Clone quality: bE147P9 on chr=17; Num_of_Contigs=3; )
YWHAB location ⇒ 17:49124751-49125044   CU633343,CH242-147P9,17:49046271-49162684
(Clone quality: bE147P9 on chr=17; Num_of_Contigs=3; )
YWHAE location ⇒ 3:102475794-102476741   FP102541,CH242-107O14,3:102464676-102482231
(Clone quality: bE107O14 on chr=3; Num_of_Contigs=4; )
YWHAE location ⇒ 3:102476763-102477293   FP102541,CH242-107O14,3:102464676-102482231
(Clone quality: bE107O14 on chr=3; Num_of_Contigs=4; )
YWHAE location ⇒ 3:102477338-102477456   FP102541,CH242-107O14,3:102464676-102482231
(Clone quality: bE107O14 on chr=3; Num_of_Contigs=4; )
YWHAG   ENSSSCG00000007692 3:8459654-8485537    
YWHAH ENSSSCG00000010035 14:49429145-49440852 CT827879,CH242-298L14,14:49419558-49570938
(Clone quality: bE298L14 on chr=14; Num_of_Contigs=1; ) 		 
YWHAH location ⇒ 14:39189374-39189226   CU468469,CH242-242L24,14:39185321-39192765
(Clone quality: bE242L24 on chr=14; Num_of_Contigs=11; )
YWHAH location ⇒ 14:39189764-39189696   CU468469,CH242-242L24,14:39185321-39192765
(Clone quality: bE242L24 on chr=14; Num_of_Contigs=11; )
YWHAH location ⇒ 14:49429332-49429470 CT827879,CH242-298L14,14:49419558-49570938
(Clone quality: bE298L14 on chr=14; Num_of_Contigs=1; ) 		 
YWHAH location ⇒ 14:49440078-49441530 CT827879,CH242-298L14,14:49419558-49570938
(Clone quality: bE298L14 on chr=14; Num_of_Contigs=1; ) 		 
YWHAQ ENSSSCG00000008638 3:117161700-117195179    
YWHAQ location ⇒ 3:117162248-117162498   CU972371,CH242-102L8,3:117161700-117170407
(Clone quality: bE102L8 on chr=3; Num_of_Contigs=13; )
YWHAQ location ⇒ 3:117192725-117192889   CU972371,CH242-102L8,3:117177166-117221858
(Clone quality: bE102L8 on chr=3; Num_of_Contigs=13; )
YWHAQ location ⇒ 3:117194126-117195178   CU972371,CH242-102L8,3:117177166-117221858
(Clone quality: bE102L8 on chr=3; Num_of_Contigs=13; )
YWHAQ location ⇒ 3:19989299-19988586   FP102432,CH242-168B23,3:19966436-19990841
(Clone quality: bE168B23 on chr=3; Num_of_Contigs=7; )
YWHAZ ENSSSCG00000006062 4:36380559-36407373    
YWHAZ ENSSSCG00000010843 10:12048309-12049014   FP236746,CH242-115K6,10:12000562-12050827
(Clone quality: bE115K6 on chr=10; Num_of_Contigs=10; )
YWHAZ location ⇒ 10:12048519-12049049   FP236746,CH242-115K6,10:12000562-12050827
(Clone quality: bE115K6 on chr=10; Num_of_Contigs=10; )
YWHAZ location ⇒ 10:35713432-35713490   CU633163,CH242-209C6,10:35703134-35847997
(Clone quality: bE209C6 on chr=10; Num_of_Contigs=3; )
Go to records:
1-49, 50-13

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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