A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
HRG location ⇒ 13:94112886-94113198   CU633961,CH242-82L2,13:94043545-94145850
(Clone quality: bE82L2 on chr=13; Num_of_Contigs=4; )
HRG location ⇒ 13:94113445-94113887   CU633961,CH242-82L2,13:94043545-94145850
(Clone quality: bE82L2 on chr=13; Num_of_Contigs=4; )
HRH1 ENSSSCG00000011576 13:56137438-56138895   CU915532,CH242-98O11,13:56132338-56139158
(Clone quality: bE98O11 on chr=13; Num_of_Contigs=3; )
HRH1 ENSSSCG00000017378 12:17447100-17477589    
HRH1 location ⇒ 13:129024824-129024722   CU466325,CH242-227D14,13:129017962-129065515
(Clone quality: bE227D14 on chr=13; Num_of_Contigs=8; )
HRH1 location ⇒ 13:144692053-144691979   CU928443,CH242-84M16,13:144683726-144709626
(Clone quality: bE84M16 on chr=13; Num_of_Contigs=3; )
HRH1 location ⇒ 13:87661120-87661227   CU856317,CH242-95D16,13:87659327-87667285
(Clone quality: bE95D16 on chr=13; Num_of_Contigs=17; )
HRH1 location ⇒ 13:87741666-87741773   CU914671,CH242-404H6,13:87725978-87764297
(Clone quality: bE404H6 on chr=13; Num_of_Contigs=3; )
HRH2 ENSSSCG00000008756 8:15186349-15244726    
HRH2 location ⇒ 2:71025089-71025384 CU942406,CH242-482G5,2:70993683-71025558
(Clone quality: bE482G5 on chr=2; Num_of_Contigs=22; ) 		 
HRH4 ENSSSCG00000003714 6:74794115-74794684    
HRH4 location ⇒ 6:74789553-74789816   CU442754,CH242-91M4,6:74750705-74794014
(Clone quality: bE91M4 on chr=6; Num_of_Contigs=3; )
HRH4 location ⇒ 6:74794115-74794742    
HRK ENSSSCG00000009861 14:35877326-35877598   CU424482,CH242-136B9,14:35742588-35915478
(Clone quality: bE136B9 on chr=14; Num_of_Contigs=3; )
HRK location ⇒ 14:35877473-35877326   CU424482,CH242-136B9,14:35742588-35915478
(Clone quality: bE136B9 on chr=14; Num_of_Contigs=3; )
HRK location ⇒ 14:35877573-35877519   CU424482,CH242-136B9,14:35742588-35915478
(Clone quality: bE136B9 on chr=14; Num_of_Contigs=3; )
HRNR   ENSSSCG00000006611 4:101111450-101113594   CU469439,CH242-256E21,4:101110023-101141786
(Clone quality: bE256E21 on chr=4; Num_of_Contigs=4; )
HRSP12 ENSSSCG00000006079 4:38860755-38870321   CU234130,CH242-486G18,4:38849917-38907420
(Clone quality: bE486G18 on chr=4; Num_of_Contigs=7; )
HRSP12 ENSSSCG00000006079 4:38860755-38870321   CU234130,CH242-486G18,4:38849917-38907420
(Clone quality: bE486G18 on chr=4; Num_of_Contigs=7; )
HRSP12 location ⇒ 4:38862648-38862755   CU234130,CH242-486G18,4:38849917-38907420
(Clone quality: bE486G18 on chr=4; Num_of_Contigs=7; )
HS1BP3   ENSSSCG00000008597 3:109351071-109358373   CU928464,CH242-36I6,3:109335300-109368296
(Clone quality: bE36I6 on chr=3; Num_of_Contigs=5; )
HS2ST1   ENSSSCG00000006929 4:134105340-134167772   CU462959,CH242-390P3,4:134045312-134215123
(Clone quality: bE390P3 on chr=4; Num_of_Contigs=1; )
HS3ST2   ENSSSCG00000007837 3:21201185-21328190    
HS3ST4   ENSSSCG00000007822 3:19059028-19059762 CU442713,CH242-405H5,3:18960006-19139490
(Clone quality: bE405H5 on chr=3; Num_of_Contigs=11; ) 		 
HS3ST5   ENSSSCG00000004433 1:83693358-83698262   CU041333,CH242-408N4,1:83637312-83721140
(Clone quality: bE408N4 on chr=1; Num_of_Contigs=4; )
HS6ST1   ENSSSCG00000015856 15:55169666-55208658   CU570814,CH242-12B17,15:55166627-55223895
(Clone quality: bE12B17 on chr=15; Num_of_Contigs=10; )
HS6ST2   ENSSSCG00000012677 X:106685807-106813960    
HS6ST3   ENSSSCG00000009504 11:67258242-67258955   FP101899,CH242-407J8,11:67213638-67274562
(Clone quality: bE407J8 on chr=11; Num_of_Contigs=1; )
HSBP1L1   ENSSSCG00000005778 1:291015914-291027823   CU041273,CH242-39O17,1:290960996-291029484
(Clone quality: bE39O17 on chr=1; Num_of_Contigs=4; )
HSBP1P2   ENSSSCG00000000460 5:27818103-27818333   CU639402,CH242-223L20,5:27814497-27859053
(Clone quality: bE223L20 on chr=5; Num_of_Contigs=7; )
HSD11B1   ENSSSCG00000015616 9:125633551-125666772    
HSD11B13290 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
HSD11B2   ENSSSCG00000002777 6:13124823-13130473   CU929737,CH242-250E5,6:13062455-13202086
(Clone quality: bE250E5 on chr=6; Num_of_Contigs=3; )
HSD17B10   ENSSSCG00000012327 X:45635692-45638035   CU695116,CH242-358M12,X:45633256-45706192
(Clone quality: bE358M12 on chr=X; Num_of_Contigs=4; )
HSD17B13   ENSSSCG00000009225 8:113121323-113144966   CU655889,CH242-121B11,8:113119797-113145222
(Clone quality: bE121B11 on chr=8; Num_of_Contigs=11; )
HSD17B14   ENSSSCG00000003138 6:37567155-37586075   CU929759,CH242-294C24,6:37551354-37595202
(Clone quality: bE294C24 on chr=6; Num_of_Contigs=3; )
HSD17B2   ENSSSCG00000002686 6:4514200-4578665    
HSD17B3   ENSSSCG00000010937 10:25269584-25313464    
HSD17B8 ENSSSCG00000001476 7:29623336-29625502 CT737383,CH242-215D15,7:29573904-29764538
(Clone quality: bE215D15 on chr=7; Num_of_Contigs=3; ) 		 
HSD3B1 ENSSSCG00000006719 4:105760992-105769608 CR938722,CH242-150C11,4:105730208-105905927
(No clone quality info on bE150C11) 		 
HSDL1   ENSSSCG00000002681 6:3062285-3081722   FP085590,CH242-130L20,6:2950464-3147598
(Clone quality: bE130L20 on chr=6; Num_of_Contigs=2; )
HSDL2   ENSSSCG00000005467 1:265972315-266195114    
HSF1 ENSSSCG00000005917 4:656175-678778    
HSF1 location ⇒ 4:656144-656291   FP085492,CH242-176F2,4:645963-677119
(Clone quality: bE176F2 on chr=4; Num_of_Contigs=15; )
HSF1 location ⇒ 4:676430-676571   FP085492,CH242-176F2,4:645963-677119
(Clone quality: bE176F2 on chr=4; Num_of_Contigs=15; )
HSF1 location ⇒ 4:676651-676923   FP085492,CH242-176F2,4:645963-677119
(Clone quality: bE176F2 on chr=4; Num_of_Contigs=15; )
HSF1 location ⇒ 4:678573-678996   FP085492,CH242-176F2,4:677220-697185
(Clone quality: bE176F2 on chr=4; Num_of_Contigs=15; )
HSF2 ENSSSCG00000004239 1:41834091-41856606    
HSF2 location ⇒ 1:41739049-41738026   CU972418,CH242-148G13,1:41714631-41769833
(Clone quality: bE148G13 on chr=1; Num_of_Contigs=6; )
HSF2 location ⇒ 1:41748753-41748513   CU972418,CH242-148G13,1:41714631-41769833
(Clone quality: bE148G13 on chr=1; Num_of_Contigs=6; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-32

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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