A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
DUOXA1   ENSSSCG00000004677 1:132394055-132404337   CU459107,CH242-257E14,1:132383826-132520076
(Clone quality: bE257E14 on chr=1; Num_of_Contigs=5; )
DUOXA2   ENSSSCG00000004676 1:132389117-132392858   CU459107,CH242-257E14,1:132383826-132520076
(Clone quality: bE257E14 on chr=1; Num_of_Contigs=5; )
DUPD1   ENSSSCG00000010317 14:80819644-80859490   CT737343,CH242-176H24,14:80779418-80877049
(Clone quality: bE176H24 on chr=14; Num_of_Contigs=2; )
DUSP ENSSSCG00000010624 14:126513163-126524943   CT737341,CH242-168E9,14:126469219-126588763
(Clone quality: bE168E9 on chr=14; Num_of_Contigs=1; )
DUSP1 ENSSSCG00000016991 16:48835441-48838351   FP085365,CH242-276B11,16:48834848-48851388
(Clone quality: bE276B11 on chr=16; Num_of_Contigs=5; )
DUSP1 ENSSSCG00000006347 4:92520823-92527635   CU468575,CH242-447O4,4:92504475-92541794
(Clone quality: bE447O4 on chr=4; Num_of_Contigs=10; )
DUSP1 location ⇒ 16:48835472-48836078   FP085365,CH242-276B11,16:48834848-48851388
(Clone quality: bE276B11 on chr=16; Num_of_Contigs=5; )
DUSP1 location ⇒ 16:48836352-48836500   FP085365,CH242-276B11,16:48834848-48851388
(Clone quality: bE276B11 on chr=16; Num_of_Contigs=5; )
DUSP1 location ⇒ 16:48836837-48837060   FP085365,CH242-276B11,16:48834848-48851388
(Clone quality: bE276B11 on chr=16; Num_of_Contigs=5; )
DUSP1 location ⇒ 16:48837496-48838538   FP085365,CH242-276B11,16:48834848-48851388
(Clone quality: bE276B11 on chr=16; Num_of_Contigs=5; )
DUSP10 ENSSSCG00000010831 10:10928402-10966397    
DUSP10 location ⇒ 10:10964132-10963436   CU570750,CH242-3O5,10:10939430-10967496
(Clone quality: bE3O5 on chr=10; Num_of_Contigs=6; )
DUSP10 location ⇒ 10:10966358-10966254   CU570750,CH242-3O5,10:10939430-10967496
(Clone quality: bE3O5 on chr=10; Num_of_Contigs=6; )
DUSP11   ENSSSCG00000008298 3:63660001-63680695   CU463123,CH242-385I3,3:63654379-63692155
(Clone quality: bE385I3 on chr=3; Num_of_Contigs=11; )
DUSP12   ENSSSCG00000006347 4:92520823-92527635   CU468575,CH242-447O4,4:92504475-92541794
(Clone quality: bE447O4 on chr=4; Num_of_Contigs=10; )
DUSP13 ENSSSCG00000010318 14:80881899-80890760   CT737343,CH242-176H24,14:80877150-80974625
(Clone quality: bE176H24 on chr=14; Num_of_Contigs=2; )
DUSP13 location ⇒ 14:80882352-80881899   CT737343,CH242-176H24,14:80877150-80974625
(Clone quality: bE176H24 on chr=14; Num_of_Contigs=2; )
DUSP13 location ⇒ 14:80883254-80883056   CT737343,CH242-176H24,14:80877150-80974625
(Clone quality: bE176H24 on chr=14; Num_of_Contigs=2; )
DUSP15 ENSSSCG00000007233 17:37513376-37513543   CU694986,CH242-170L12,17:37507145-37590918
(Clone quality: bE170L12 on chr=17; Num_of_Contigs=5; )
DUSP15 ENSSSCG00000007232 17:37474353-37483430    
DUSP15 location ⇒ 17:37482293-37482465   CU633584,CH242-3H14,17:37481760-37487073
(Clone quality: bE3H14 on chr=17; Num_of_Contigs=10; )
DUSP15 location ⇒ 17:37483315-37483410   CU633584,CH242-3H14,17:37481760-37487073
(Clone quality: bE3H14 on chr=17; Num_of_Contigs=10; )
DUSP15 location ⇒ 17:37513392-37513564   CU694986,CH242-170L12,17:37507145-37590918
(Clone quality: bE170L12 on chr=17; Num_of_Contigs=5; )
DUSP15 location ⇒ 17:37514414-37514509   CU694986,CH242-170L12,17:37507145-37590918
(Clone quality: bE170L12 on chr=17; Num_of_Contigs=5; )
DUSP18 ENSSSCG00000010013 14:48345979-48346545   CT827803,CH242-235K4,14:48304424-48349386
(Clone quality: bE235K4 on chr=14; Num_of_Contigs=6; )
DUSP18 location ⇒ 14:48346614-48345952   CT827803,CH242-235K4,14:48304424-48349386
(Clone quality: bE235K4 on chr=14; Num_of_Contigs=6; )
DUSP19   ENSSSCG00000016020 15:83177469-83191279    
DUSP2 ENSSSCG00000008128 3:42031534-42232981    
DUSP21 location ⇒ X:39482743-39482079   CU855539,CH242-517A18,X:39474551-39495434
(Clone quality: bE517A18 on chr=X; Num_of_Contigs=7; )
DUSP21 location ⇒ X:39864139-39864803   CU468333,CH242-231F21,X:39859974-39871992
(Clone quality: bE231F21 on chr=X; Num_of_Contigs=4; )
DUSP26   ENSSSCG00000015835 15:49385868-49391892   FP102412,CH242-94A16,15:49383913-49421146
(Clone quality: bE94A16 on chr=15; Num_of_Contigs=2; )
DUSP28   ENSSSCG00000016366 15:131709084-131710145   FP017225,CH242-111J1,15:131705999-131712988
(Clone quality: bE111J1 on chr=15; Num_of_Contigs=7; )
DUSP3   ENSSSCG00000017374 12:17248235-17260637   CU928405,CH242-149G4,12:17230645-17278372
(Clone quality: bE149G4 on chr=12; Num_of_Contigs=4; )
DUSP4 ENSSSCG00000015850 15:52508884-52522145   CU914407,CH242-197A18,15:52450254-52564785
(Clone quality: bE197A18 on chr=15; Num_of_Contigs=4; )
DUSP6 location ⇒ 5:88862791-88862323   CU571412,CH242-396I24,5:88859659-88862903
(Clone quality: bE396I24 on chr=5; Num_of_Contigs=16; )
DUSP7   ENSSSCG00000011430 13:28836073-28838283    
DVL1   ENSSSCG00000003342 6:42930304-42935647   FP102596,CH242-173K23,6:42905835-42937819
(Clone quality: bE173K23 on chr=6; Num_of_Contigs=10; )
DYDC1   ENSSSCG00000010338 14:85659757-85679660    
DYDC2   ENSSSCG00000010339 14:85679684-85691469   CU633299,CH242-455F21,14:85662691-85695429
(Clone quality: bE455F21 on chr=14; Num_of_Contigs=5; )
DYM   ENSSSCG00000004508 1:101800607-101935426    
DYNC1I1   ENSSSCG00000015335 9:70834647-70966726    
DYNC1I2   ENSSSCG00000015948 15:72837925-72878324    
DYNC1LI1   ENSSSCG00000011233 13:16034648-16055471   CU695035,CH242-232M3,13:16010561-16074512
(Clone quality: bE232M3 on chr=13; Num_of_Contigs=6; )
DYNC2LI1   ENSSSCG00000008457 3:90084789-90134015    
DYNLL1 ENSSSCG00000009904 14:40506277-40508870   CU468509,CH242-66D17,14:40499959-40518844
(Clone quality: bE66D17 on chr=14; Num_of_Contigs=12; )
DYNLL1 location ⇒ 14:40506897-40506489   CU468509,CH242-66D17,14:40499959-40518844
(Clone quality: bE66D17 on chr=14; Num_of_Contigs=12; )
DYNLL1 location ⇒ 14:40508520-40508381   CU468509,CH242-66D17,14:40499959-40518844
(Clone quality: bE66D17 on chr=14; Num_of_Contigs=12; )
DYNLL1 location ⇒ 14:40508887-40508739   CU468509,CH242-66D17,14:40499959-40518844
(Clone quality: bE66D17 on chr=14; Num_of_Contigs=12; )
DYNLL2   ENSSSCG00000017629 12:32308701-32313938   CU914501,CH242-205G24,12:32308660-32325624
(Clone quality: bE205G24 on chr=12; Num_of_Contigs=21; )
DYNLRB1   ENSSSCG00000007279 17:39874656-39882917   CU606999,CH242-187B10,17:39866484-39884553
(Clone quality: bE187B10 on chr=17; Num_of_Contigs=9; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-16

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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