A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
FN3K   ENSSSCG00000017131 12:230102-231777   FP236791,CH242-196C17,12:229707-232446
(Clone quality: bE196C17 on chr=12; Num_of_Contigs=8; )
FN3KRP   ENSSSCG00000017134 12:362061-369417    
FNBP1   ENSSSCG00000005689 1:284830774-284878744    
FNBP1L   ENSSSCG00000006894 4:128008001-128060689   CU469025,CH242-391D20,4:127964296-128108482
(Clone quality: bE391D20 on chr=4; Num_of_Contigs=2; )
FNBP4   ENSSSCG00000013222 2:12845182-12854650    
FNDC1   ENSSSCG00000004052 1:9119297-9194462    
FNDC3B   ENSSSCG00000011752 13:83965460-84311552    
FNDC7   ENSSSCG00000006844 4:115813999-115842768    
FNIP1   ENSSSCG00000014269 2:121817935-121891652    
FNIP2   ENSSSCG00000008879 8:41282728-41421992    
FNTB   ENSSSCG00000002281 7:97611150-97644823   CU655896,CH242-141A2,7:97608114-97690480
(Clone quality: bE141A2 on chr=7; Num_of_Contigs=2; )
FOLR1 ENSSSCG00000014810 9:6250720-6264875    
FOLR1 location ⇒ 9:26793059-26793117   CU896620,CH242-350A15,9:26761383-26794244
(Clone quality: bE350A15 on chr=9; Num_of_Contigs=9; )
FOLR1 location ⇒ 9:6254458-6254582   FP090889,CH242-166B16,9:6218144-6259348
(Clone quality: bE166B16 on chr=9; Num_of_Contigs=3; )
FOLR1 location ⇒ 9:6264195-6264312   FP090889,CH242-166B16,9:6259449-6281618
(Clone quality: bE166B16 on chr=9; Num_of_Contigs=3; )
FOLR1 location ⇒ 9:6307890-6307773   FP090889,CH242-166B16,9:6304007-6308647
(Clone quality: bE166B16 on chr=9; Num_of_Contigs=3; )
FOLR3   ENSSSCG00000014812 9:6306934-6308207   FP090889,CH242-166B16,9:6304007-6308647
(Clone quality: bE166B16 on chr=9; Num_of_Contigs=3; )
FOLR4   ENSSSCG00000014952 9:26791391-26863131    
FOS ENSSSCG00000012967 2:4807530-4812901   CU928325,CH242-208C18,2:4805866-4836669
(Clone quality: bE208C18 on chr=2; Num_of_Contigs=5; )
FOS ENSSSCG00000012135 X:11163310-11203476    
FOS ENSSSCG00000002885 6:30028890-30037927   CU694505,CH242-50N19,6:30028872-30044834
(Clone quality: bE50N19 on chr=6; Num_of_Contigs=14; )
FOS ENSSSCG00000002383 7:106703440-106706873   CU468894,CH242-443L14,7:106695626-106764261
(Clone quality: bE443L14 on chr=7; Num_of_Contigs=5; )
FOS location ⇒ 7:106703440-106703740   CU468894,CH242-443L14,7:106695626-106764261
(Clone quality: bE443L14 on chr=7; Num_of_Contigs=5; )
FOS location ⇒ 7:106704496-106704749   CU468894,CH242-443L14,7:106695626-106764261
(Clone quality: bE443L14 on chr=7; Num_of_Contigs=5; )
FOS location ⇒ 7:106705420-106706690   CU468894,CH242-443L14,7:106695626-106764261
(Clone quality: bE443L14 on chr=7; Num_of_Contigs=5; )
FOS location ⇒ 7:21010080-21009907   CU468933,CH242-200A13,7:21009801-21031773
(Clone quality: bE200A13 on chr=7; Num_of_Contigs=28; )
FOSB location ⇒ 15:20304182-20304131   FP015797,CH242-252K7,15:20286554-20343792
(Clone quality: bE252K7 on chr=15; Num_of_Contigs=8; )
FOSL1 ENSSSCG00000012967 2:4807530-4812901   CU928325,CH242-208C18,2:4805866-4836669
(Clone quality: bE208C18 on chr=2; Num_of_Contigs=5; )
FOSL1 location ⇒ 2:4807530-4807873   CU928325,CH242-208C18,2:4805866-4836669
(Clone quality: bE208C18 on chr=2; Num_of_Contigs=5; )
FOSL1 location ⇒ 2:4809851-4810051   CU928325,CH242-208C18,2:4805866-4836669
(Clone quality: bE208C18 on chr=2; Num_of_Contigs=5; )
FOSL1 location ⇒ 2:4811963-4812074   CU928325,CH242-208C18,2:4805866-4836669
(Clone quality: bE208C18 on chr=2; Num_of_Contigs=5; )
FOSL1 location ⇒ 2:4812481-4813550   CU928325,CH242-208C18,2:4805866-4836669
(Clone quality: bE208C18 on chr=2; Num_of_Contigs=5; )
FOXA1   ENSSSCG00000001940 7:68397416-68401392 CT737389,CH242-40A13,7:68334225-68505527
(Clone quality: bE40A13 on chr=7; Num_of_Contigs=2; ) 		 
FOXA2   ENSSSCG00000007114 17:31467175-31469582   CU633667,CH242-230N8,17:31457172-31570046
(Clone quality: bE230N8 on chr=17; Num_of_Contigs=3; )
FOXA3   ENSSSCG00000003092 6:35987315-35994206    
FOXC2   ENSSSCG00000002659 6:1373200-1373433   FP102684,CH242-354G10,6:1372429-1414131
(Clone quality: bE354G10 on chr=6; Num_of_Contigs=3; )
FOXE1   ENSSSCG00000005369 1:251243614-251244735   CU234153,CH242-205E18,1:251223267-251272093
(Clone quality: bE205E18 on chr=1; Num_of_Contigs=8; )
FOXE3   ENSSSCG00000003884 6:117457269-117458243   CU694906,CH242-407D16,6:117451022-117464053
(Clone quality: bE407D16 on chr=6; Num_of_Contigs=5; )
FOXF2   ENSSSCG00000000992 7:794133-794582   CU012041,CH242-398E3,7:793961-818650
(Clone quality: bE398E3 on chr=7; Num_of_Contigs=7; )
FOXH1 ENSSSCG00000005902 4:440052-441495   CU468594,CH242-10O17,4:360104-442995
(Clone quality: bE10O17 on chr=4; Num_of_Contigs=10; )
FOXI1   ENSSSCG00000017009 16:51165572-51168288   CU694271,CH242-177C11,16:51158379-51182991
(Clone quality: bE177C11 on chr=16; Num_of_Contigs=10; )
FOXI2   ENSSSCG00000010752 14:144091014-144092731   CU571233,CH242-498G20,14:143906931-144119687
(Clone quality: bE498G20 on chr=14; Num_of_Contigs=1; )
FOXJ1 ENSSSCG00000017187 12:3655842-3656597   CU694895,CH242-350N8,12:3655784-3657854
(Clone quality: bE350N8 on chr=12; Num_of_Contigs=14; )
FOXK2 ENSSSCG00000017125 12:16293-58619 FP085448,CH242-272C22,12:1-58755
(Clone quality: bE272C22 on chr=12; Num_of_Contigs=8; ) 		 
FOXK2 location ⇒ 12:25738-25889 FP085448,CH242-272C22,12:1-58755
(Clone quality: bE272C22 on chr=12; Num_of_Contigs=8; ) 		 
FOXK2 location ⇒ 12:259991-260142   FP236791,CH242-196C17,12:250474-261090
(Clone quality: bE196C17 on chr=12; Num_of_Contigs=8; )
FOXK2 location ⇒ 12:262820-263014   FP236791,CH242-196C17,12:261191-287454
(Clone quality: bE196C17 on chr=12; Num_of_Contigs=8; )
FOXK2 location ⇒ 12:28815-29010 FP085448,CH242-272C22,12:1-58755
(Clone quality: bE272C22 on chr=12; Num_of_Contigs=8; ) 		 
FOXL1 ENSSSCG00000002658 6:1362077-1363090   FP102684,CH242-354G10,6:1324066-1372328
(Clone quality: bE354G10 on chr=6; Num_of_Contigs=3; )
FOXM1   ENSSSCG00000000739 5:63124994-63138294    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-22

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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