A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
DBI   ENSSSCG00000015719 15:23572436-23577766   CU861525,CH242-168K13,15:23527317-23663672
(Clone quality: bE168K13 on chr=15; Num_of_Contigs=2; )
DBNDD1   ENSSSCG00000002637 6:130905-132406   FP102308,CH242-96G18,6:122037-141818
(Clone quality: bE96G18 on chr=6; Num_of_Contigs=17; )
DBNL ENSSSCG00000016721 18:47355882-47367807   FP236704,CH242-239B21,18:47321386-47379618
(Clone quality: bE239B21 on chr=18; Num_of_Contigs=4; )
DBNL location ⇒ 18:47360338-47360189   FP236704,CH242-239B21,18:47321386-47379618
(Clone quality: bE239B21 on chr=18; Num_of_Contigs=4; )
DBNL location ⇒ 18:47361256-47361180   FP236704,CH242-239B21,18:47321386-47379618
(Clone quality: bE239B21 on chr=18; Num_of_Contigs=4; )
DBNL location ⇒ 18:47361894-47361781   FP236704,CH242-239B21,18:47321386-47379618
(Clone quality: bE239B21 on chr=18; Num_of_Contigs=4; )
DBNL location ⇒ 18:47367785-47367672   FP236704,CH242-239B21,18:47321386-47379618
(Clone quality: bE239B21 on chr=18; Num_of_Contigs=4; )
DBP ENSSSCG00000003148 6:37718364-37722216    
DBP ENSSSCG00000008619 3:113249413-113258338    
DBP location ⇒ 6:37718513-37718907   CU929759,CH242-294C24,6:37595303-37722216
(Clone quality: bE294C24 on chr=6; Num_of_Contigs=3; )
DBP location ⇒ 6:37719894-37720137   CU929759,CH242-294C24,6:37595303-37722216
(Clone quality: bE294C24 on chr=6; Num_of_Contigs=3; )
DBP location ⇒ 6:37720218-37720305   CU929759,CH242-294C24,6:37595303-37722216
(Clone quality: bE294C24 on chr=6; Num_of_Contigs=3; )
DBP location ⇒ 6:37722024-37722216    
DBT   ENSSSCG00000006866 4:122750420-122786920    
DBX1   ENSSSCG00000013350 2:36627173-36631193   CU571227,CH242-358C11,2:36606628-36644365
(Clone quality: bE358C11 on chr=2; Num_of_Contigs=10; )
DC2 ENSSSCG00000009145 8:97440140-97451351   CU463349,CH242-219F15,8:97430864-97459105
(Clone quality: bE219F15 on chr=8; Num_of_Contigs=4; )
DC2 location ⇒ 8:97444929-97444728   CU463349,CH242-219F15,8:97430864-97459105
(Clone quality: bE219F15 on chr=8; Num_of_Contigs=4; )
DC2 location ⇒ 8:97446106-97446011   CU463349,CH242-219F15,8:97430864-97459105
(Clone quality: bE219F15 on chr=8; Num_of_Contigs=4; )
DC2 location ⇒ 8:97451356-97451148   CU463349,CH242-219F15,8:97430864-97459105
(Clone quality: bE219F15 on chr=8; Num_of_Contigs=4; )
DCAF13   ENSSSCG00000006048 4:34044067-34075174    
DCAF15   ENSSSCG00000013763 2:56955436-56963124   FP016000,CH242-10C10,2:56952814-57017364
(Clone quality: bE10C10 on chr=2; Num_of_Contigs=2; )
DCAF5   ENSSSCG00000002303 7:101069608-101141030    
DCAF7   ENSSSCG00000017294 12:12909322-12936266   CU929939,CH242-45G1,12:12889620-12949393
(Clone quality: bE45G1 on chr=12; Num_of_Contigs=5; )
DCAKD   ENSSSCG00000017340 12:16208989-16227922   CU463967,CH242-394M10,12:16196506-16272592
(Clone quality: bE394M10 on chr=12; Num_of_Contigs=5; )
DCBLD1 ENSSSCG00000004254 1:46242475-46290331   CU694620,CH242-40E16,1:46176101-46306057
(Clone quality: bE40E16 on chr=1; Num_of_Contigs=3; )
DCBLD1 location ⇒ 1:46243224-46243065   CU694620,CH242-40E16,1:46176101-46306057
(Clone quality: bE40E16 on chr=1; Num_of_Contigs=3; )
DCBLD1 location ⇒ 1:46249587-46249424   CU694620,CH242-40E16,1:46176101-46306057
(Clone quality: bE40E16 on chr=1; Num_of_Contigs=3; )
DCBLD1 location ⇒ 1:46250235-46250107   CU694620,CH242-40E16,1:46176101-46306057
(Clone quality: bE40E16 on chr=1; Num_of_Contigs=3; )
DCBLD1 location ⇒ 1:46309266-46309103   CU462921,CH242-187P2,1:46306058-46354994
(Clone quality: bE187P2 on chr=1; Num_of_Contigs=3; )
DCBLD2 ENSSSCG00000011977 13:118385573-118398549   CU469278,CH242-94N13,13:118385485-118398583
(Clone quality: bE94N13 on chr=13; Num_of_Contigs=19; )
DCC ENSSSCG00000004931 1:170390013-170403202   CU633232,CH242-191H9,1:170387390-170434800
(Clone quality: bE191H9 on chr=1; Num_of_Contigs=6; )
DCC ENSSSCG00000001921 7:65557820-65791036    
DCC ENSSSCG00000004526 1:105203739-106113828    
DCC ENSSSCG00000004932 1:170410018-170452342    
DCC location ⇒ 1:105957435-105957545   CU407219,CH242-375M16,1:105944747-106047547
(Clone quality: bE375M16 on chr=1; Num_of_Contigs=4; )
DCC location ⇒ 1:105963109-105963249   CU407219,CH242-375M16,1:105944747-106047547
(Clone quality: bE375M16 on chr=1; Num_of_Contigs=4; )
DCC location ⇒ 1:105969224-105969334   CU407219,CH242-375M16,1:105944747-106047547
(Clone quality: bE375M16 on chr=1; Num_of_Contigs=4; )
DCC location ⇒ 1:105979728-105979780   CU407219,CH242-375M16,1:105944747-106047547
(Clone quality: bE375M16 on chr=1; Num_of_Contigs=4; )
DCDC1   ENSSSCG00000013324 2:27364728-27416414 CU466329,CH242-361H19,2:27335366-27528624
(Clone quality: bE361H19 on chr=2; Num_of_Contigs=10; ) 		 
DCDC2   ENSSSCG00000001085 7:20055850-20225475    
DCDC5   ENSSSCG00000013326 2:27697820-27749504    
DCHS2 ENSSSCG00000009000 8:64129049-64134617   CU928251,CH242-265D20,8:64113830-64172984
(Clone quality: bE265D20 on chr=8; Num_of_Contigs=7; )
DCHS2 location ⇒ 8:64128921-64129493   CU928251,CH242-265D20,8:64113830-64172984
(Clone quality: bE265D20 on chr=8; Num_of_Contigs=7; )
DCK   ENSSSCG00000008942 8:57527795-57552375   CU638721,CH242-211A6,8:57483206-57610065
(Clone quality: bE211A6 on chr=8; Num_of_Contigs=2; )
DCLK1 ENSSSCG00000009352 11:11319589-11495501    
DCLK1 location ⇒ 11:11321634-11321500   CU463137,CH242-211O1,11:11319560-11409566
(Clone quality: bE211O1 on chr=11; Num_of_Contigs=4; )
DCLK1 location ⇒ 11:11338906-11338852   CU463137,CH242-211O1,11:11319560-11409566
(Clone quality: bE211O1 on chr=11; Num_of_Contigs=4; )
DCLK1 location ⇒ 11:11490671-11490289   CU914595,CH242-97G16,11:11486257-11495546
(Clone quality: bE97G16 on chr=11; Num_of_Contigs=10; )
DCLK1 location ⇒ 11:11668408-11668056   CU914595,CH242-97G16,11:11660051-11668703
(Clone quality: bE97G16 on chr=11; Num_of_Contigs=10; )
DCLK2   ENSSSCG00000009023 8:67784193-67892984    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-16

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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