A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
TNFRSF9 location ⇒ 6:46290499-46290568   FP104566,CH242-221K1,6:46283879-46291204
(Clone quality: bE221K1 on chr=6; Num_of_Contigs=13; )
TNFRSF9 location ⇒ 6:46291429-46291565   FP104566,CH242-221K1,6:46291305-46307687
(Clone quality: bE221K1 on chr=6; Num_of_Contigs=13; )
TNFRSF9 location ⇒ 6:46302346-46302451   FP104566,CH242-221K1,6:46291305-46307687
(Clone quality: bE221K1 on chr=6; Num_of_Contigs=13; )
TNFRSF93604 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
TNFSF10 ENSSSCG00000011753 13:84368606-84375337   CU582893,CH242-370P10,13:84367647-84389669
(Clone quality: bE370P10 on chr=13; Num_of_Contigs=7; )
TNFSF10 location ⇒ 13:84374895-84375048   CU582893,CH242-370P10,13:84367647-84389669
(Clone quality: bE370P10 on chr=13; Num_of_Contigs=7; )
TNFSF10 location ⇒ 13:84375116-84375337   CU582893,CH242-370P10,13:84367647-84389669
(Clone quality: bE370P10 on chr=13; Num_of_Contigs=7; )
TNFSF10 location ⇒ 13:84414942-84414814   CU582893,CH242-370P10,13:84406962-84415922
(Clone quality: bE370P10 on chr=13; Num_of_Contigs=7; )
TNFSF10 location ⇒ 13:84419143-84419055   CU463167,CH242-393A19,13:84415923-84573669
(Clone quality: bE393A19 on chr=13; Num_of_Contigs=1; )
TNFSF108743 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
TNFSF11 ENSSSCG00000009429 11:23440880-23475580    
TNFSF11 location ⇒ 11:23441302-23440880   CU024906,CH242-38F11,11:23434097-23447662
(Clone quality: bE38F11 on chr=11; Num_of_Contigs=6; )
TNFSF11 location ⇒ 11:23447154-23447052   CU024906,CH242-38F11,11:23434097-23447662
(Clone quality: bE38F11 on chr=11; Num_of_Contigs=6; )
TNFSF11 location ⇒ 11:23468482-23468311   CU024906,CH242-38F11,11:23447763-23482312
(Clone quality: bE38F11 on chr=11; Num_of_Contigs=6; )
TNFSF13B ENSSSCG00000009542 11:76045559-76077251    
TNFSF13B location ⇒ 11:76045559-76045751   CU019537,CH242-348M19,11:76040509-76076690
(Clone quality: bE348M19 on chr=11; Num_of_Contigs=3; )
TNFSF13B location ⇒ 11:76073278-76073394   CU019537,CH242-348M19,11:76040509-76076690
(Clone quality: bE348M19 on chr=11; Num_of_Contigs=3; )
TNFSF13B location ⇒ 11:76073474-76073629   CU019537,CH242-348M19,11:76040509-76076690
(Clone quality: bE348M19 on chr=11; Num_of_Contigs=3; )
TNFSF13B location ⇒ 11:76076839-76077251   CU019537,CH242-348M19,11:76076791-76080411
(Clone quality: bE348M19 on chr=11; Num_of_Contigs=3; )
TNFSF14 ENSSSCG00000013549 2:50037626-50041232   CU694937,CH242-71B7,2:49979846-50046985
(Clone quality: bE71B7 on chr=2; Num_of_Contigs=4; )
TNFSF18 ENSSSCG00000015487 9:108395400-108404127   FP102846,CH242-165D11,9:108331151-108415071
(Clone quality: bE165D11 on chr=9; Num_of_Contigs=5; )
TNFSF18 location ⇒ 9:108395695-108395353   FP102846,CH242-165D11,9:108331151-108415071
(Clone quality: bE165D11 on chr=9; Num_of_Contigs=5; )
TNFSF4 ENSSSCG00000015488 9:108497429-108516369    
TNFSF4 location ⇒ 9:108494746-108495101   FP102846,CH242-165D11,9:108457150-108509916
(Clone quality: bE165D11 on chr=9; Num_of_Contigs=5; )
TNFSF5IP1 location ⇒ 8:89493782-89492778   CU638686,CH242-511I21,8:89441314-89612797
(Clone quality: bE511I21 on chr=8; Num_of_Contigs=2; )
TNFSF7 location ⇒ 2:49855569-49855718   CU929921,CH242-352E11,2:49850244-49867632
(Clone quality: bE352E11 on chr=2; Num_of_Contigs=12; )
TNFSF7 location ⇒ 2:49858140-49858531   CU929921,CH242-352E11,2:49850244-49867632
(Clone quality: bE352E11 on chr=2; Num_of_Contigs=12; )
TNFSF7 location ⇒ 2:49989004-49988613   CU694937,CH242-71B7,2:49979846-50046985
(Clone quality: bE71B7 on chr=2; Num_of_Contigs=4; )
TNFSF7 location ⇒ 2:49991575-49991426   CU694937,CH242-71B7,2:49979846-50046985
(Clone quality: bE71B7 on chr=2; Num_of_Contigs=4; )
TNFSF8 ENSSSCG00000005495 1:268520497-268543333   CU466939,CH242-294C3,1:268496622-268544262
(Clone quality: bE294C3 on chr=1; Num_of_Contigs=9; )
TNFSF8 location ⇒ 1:268520893-268520497   CU466939,CH242-294C3,1:268496622-268544262
(Clone quality: bE294C3 on chr=1; Num_of_Contigs=9; )
TNFSF8 location ⇒ 1:268522444-268522371   CU466939,CH242-294C3,1:268496622-268544262
(Clone quality: bE294C3 on chr=1; Num_of_Contigs=9; )
TNFSF8 location ⇒ 1:268543333-268543138   CU466939,CH242-294C3,1:268496622-268544262
(Clone quality: bE294C3 on chr=1; Num_of_Contigs=9; )
TNFSF9 ENSSSCG00000013544 2:49907848-49910591    
TNIP1 ENSSSCG00000017091 16:69380354-69407955    
TNIP1 location ⇒ 16:69343386-69343569    
TNIP1 location ⇒ 16:69383706-69383897   CU915698,CH242-91L11,16:69382659-69393485
(Clone quality: bE91L11 on chr=16; Num_of_Contigs=4; )
TNIP1 location ⇒ 16:69406960-69407265   CU915698,CH242-91L11,16:69401767-69407405
(Clone quality: bE91L11 on chr=16; Num_of_Contigs=4; )
TNIP1 location ⇒ 16:69407506-69407951    
TNIP2 ENSSSCG00000008691 8:919341-923975   CU930000,CH242-128J21,8:903580-924566
(Clone quality: bE128J21 on chr=8; Num_of_Contigs=8; )
TNIP3   ENSSSCG00000009100 8:88730620-88763504   CU655981,CH242-199N6,8:88723729-88771214
(Clone quality: bE199N6 on chr=8; Num_of_Contigs=3; )
TNK2 ENSSSCG00000011849 13:100885087-100926825 CU914410,CH242-221N4,13:100807413-100933455
(Clone quality: bE221N4 on chr=13; Num_of_Contigs=10; ) 		 
TNK2 location ⇒ 13:100907777-100907961 CU914410,CH242-221N4,13:100807413-100933455
(Clone quality: bE221N4 on chr=13; Num_of_Contigs=10; ) 		 
TNK2 location ⇒ 13:100908941-100909015 CU914410,CH242-221N4,13:100807413-100933455
(Clone quality: bE221N4 on chr=13; Num_of_Contigs=10; ) 		 
TNK2 location ⇒ 13:100910901-100911154 CU914410,CH242-221N4,13:100807413-100933455
(Clone quality: bE221N4 on chr=13; Num_of_Contigs=10; ) 		 
TNKS   ENSSSCG00000015851 15:52536020-52704716    
TNKS2 ENSSSCG00000010465 14:108516827-108579616   CU407271,CH242-475N15,14:108479532-108605472
(Clone quality: bE475N15 on chr=14; Num_of_Contigs=1; )
TNKS2 location ⇒ 14:108516671-108517006   CU407271,CH242-475N15,14:108479532-108605472
(Clone quality: bE475N15 on chr=14; Num_of_Contigs=1; )
TNKS2 location ⇒ 14:108541929-108541996   CU407271,CH242-475N15,14:108479532-108605472
(Clone quality: bE475N15 on chr=14; Num_of_Contigs=1; )
TNKS2 location ⇒ 14:108579569-108580440   CU407271,CH242-475N15,14:108479532-108605472
(Clone quality: bE475N15 on chr=14; Num_of_Contigs=1; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-1450, 1451-1500, 1501-1550, 1551-1600, 1601-1650, 1651-1700, 1701-1750, 1751-1800, 1801-1850, 1851-8

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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