A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
TOP1MT   ENSSSCG00000006958 4:136080586-136094999   FP085504,CH242-211G21,4:136072274-136113632
(Clone quality: bE211G21 on chr=4; Num_of_Contigs=4; )
TOP2A   ENSSSCG00000017473 12:19831692-19858974    
TOP2B   ENSSSCG00000011213 13:10342437-10397763   CU582923,CH242-318I8,13:10302635-10467629
(Clone quality: bE318I8 on chr=13; Num_of_Contigs=1; )
TOPORS ENSSSCG00000011004 10:32463622-32473371   CU928691,CH242-242E10,10:32318250-32480524
(Clone quality: bE242E10 on chr=10; Num_of_Contigs=1; )
TOPORS location ⇒ 10:32463624-32463819   CU928691,CH242-242E10,10:32318250-32480524
(Clone quality: bE242E10 on chr=10; Num_of_Contigs=1; )
TOPORS location ⇒ 10:32470427-32472870   CU928691,CH242-242E10,10:32318250-32480524
(Clone quality: bE242E10 on chr=10; Num_of_Contigs=1; )
TOPORS location ⇒ 10:32472922-32473484   CU928691,CH242-242E10,10:32318250-32480524
(Clone quality: bE242E10 on chr=10; Num_of_Contigs=1; )
TOPORS location ⇒ 10:32473541-32473975   CU928691,CH242-242E10,10:32318250-32480524
(Clone quality: bE242E10 on chr=10; Num_of_Contigs=1; )
TOR1AIP1   ENSSSCG00000015530 9:114011024-114016678    
TOR2A   ENSSSCG00000005619 1:282585093-282588896   FP102445,CH242-434F23,1:282582851-282621872
(Clone quality: bE434F23 on chr=1; Num_of_Contigs=8; )
TOR3A ENSSSCG00000015525 9:113587047-113591590    
TOR3A location ⇒ 9:113587055-113587344   FP016104,CH242-78P4,9:113578748-113588101
(Clone quality: bE78P4 on chr=9; Num_of_Contigs=6; )
TOR3A location ⇒ 9:113588247-113588362   FP016104,CH242-78P4,9:113588202-113593703
(Clone quality: bE78P4 on chr=9; Num_of_Contigs=6; )
TOR3A location ⇒ 9:113589375-113589643   FP016104,CH242-78P4,9:113588202-113593703
(Clone quality: bE78P4 on chr=9; Num_of_Contigs=6; )
TOR3A location ⇒ 9:113591124-113591299   FP016104,CH242-78P4,9:113588202-113593703
(Clone quality: bE78P4 on chr=9; Num_of_Contigs=6; )
TOX   ENSSSCG00000006235 4:76795888-76942968    
TOX3   ENSSSCG00000002835 6:22583414-22613857   CU457410,CH242-36K11,6:22572591-22709391
(Clone quality: bE36K11 on chr=6; Num_of_Contigs=2; )
TOX4 location ⇒ 13:137875161-137875087   CU466406,CH242-477F6,13:137798538-137879965
(Clone quality: bE477F6 on chr=13; Num_of_Contigs=7; )
TOX4 location ⇒ 13:137876691-137875463   CU466406,CH242-477F6,13:137798538-137879965
(Clone quality: bE477F6 on chr=13; Num_of_Contigs=7; )
TOX4 location ⇒ 13:137877028-137876728   CU466406,CH242-477F6,13:137798538-137879965
(Clone quality: bE477F6 on chr=13; Num_of_Contigs=7; )
TOX4 location ⇒ 13:137877112-137877028   CU466406,CH242-477F6,13:137798538-137879965
(Clone quality: bE477F6 on chr=13; Num_of_Contigs=7; )
TP53 ENSSSCG00000004153 1:27726703-27782898    
TP53 ENSSSCG00000000726 5:61803651-61815808   CU457725,CH242-403B8,5:61794410-61821976
(Clone quality: bE403B8 on chr=5; Num_of_Contigs=3; )
TP53 ENSSSCG00000007452 17:50969389-50972168   CU640476,CH242-377A5,17:50965070-50972897
(Clone quality: bE377A5 on chr=17; Num_of_Contigs=17; )
TP53 ENSSSCG00000006058 4:35169256-35201595   CU207279,CH242-480J8,4:35099646-35225473
(Clone quality: bE480J8 on chr=4; Num_of_Contigs=3; )
TP53 ENSSSCG00000017950 12:49984267-49998390 CU914279,CH242-411E2,12:49887557-50072341
(Clone quality: bE411E2 on chr=10; Num_of_Contigs=3; ) 		 
TP53 ENSSSCG00000009908 14:40550770-40552174    
TP53 ENSSSCG00000007402 17:49706832-49711543   CU606851,CH242-219J22,17:49702863-49721558
(Clone quality: bE219J22 on chr=17; Num_of_Contigs=12; )
TP53 location ⇒ 12:49993977-49994232 CU914279,CH242-411E2,12:49887557-50072341
(Clone quality: bE411E2 on chr=10; Num_of_Contigs=3; ) 		 
TP53 location ⇒ 12:49994674-49994863 CU914279,CH242-411E2,12:49887557-50072341
(Clone quality: bE411E2 on chr=10; Num_of_Contigs=3; ) 		 
TP53 location ⇒ 12:49994951-49995067 CU914279,CH242-411E2,12:49887557-50072341
(Clone quality: bE411E2 on chr=10; Num_of_Contigs=3; ) 		 
TP53 location ⇒ 12:49995715-49995853 CU914279,CH242-411E2,12:49887557-50072341
(Clone quality: bE411E2 on chr=10; Num_of_Contigs=3; ) 		 
TP53BP1 ENSSSCG00000004707 1:134068598-134101046    
TP53BP1 location ⇒ 1:134119918-134120132    
TP53BP2   ENSSSCG00000010894 10:21010870-21049400    
TP53BP27159 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
TP53I11 ENSSSCG00000013277 2:15883298-15886932   CU861548,CH242-241H11,2:15873946-15891136
(Clone quality: bE241H11 on chr=2; Num_of_Contigs=5; )
TP53I11 location ⇒ 2:15885525-15885434   CU861548,CH242-241H11,2:15873946-15891136
(Clone quality: bE241H11 on chr=2; Num_of_Contigs=5; )
TP53I11 location ⇒ 2:15885939-15885887   CU861548,CH242-241H11,2:15873946-15891136
(Clone quality: bE241H11 on chr=2; Num_of_Contigs=5; )
TP53I11 location ⇒ 2:15886223-15886162   CU861548,CH242-241H11,2:15873946-15891136
(Clone quality: bE241H11 on chr=2; Num_of_Contigs=5; )
TP53I11 location ⇒ 2:15897916-15897759   CU861548,CH242-241H11,2:15891237-15903126
(Clone quality: bE241H11 on chr=2; Num_of_Contigs=5; )
TP53I13   ENSSSCG00000017788 12:43475935-43479656   CU463822,CH242-488A20,12:43460839-43480057
(Clone quality: bE488A20 on chr=12; Num_of_Contigs=10; )
TP53I3   ENSSSCG00000008586 3:106756959-106762368   CU928810,CH242-168M14,3:106748766-106849093
(Clone quality: bE168M14 on chr=3; Num_of_Contigs=3; )
TP53INP1   ENSSSCG00000006094 4:42100428-42107040   FP085498,CH242-18C1,4:42099477-42141852
(Clone quality: bE18C1 on chr=4; Num_of_Contigs=5; )
TP53INP2   ENSSSCG00000007283 17:40174217-40175043   CU076067,CH242-31I6,17:40109552-40175546
(Clone quality: bE31I6 on chr=17; Num_of_Contigs=2; )
TP53RK ENSSSCG00000008297 3:63643304-63650784   CU463123,CH242-385I3,3:63635986-63650897
(Clone quality: bE385I3 on chr=3; Num_of_Contigs=11; )
TP53RK ENSSSCG00000007452 17:50969389-50972168   CU640476,CH242-377A5,17:50965070-50972897
(Clone quality: bE377A5 on chr=17; Num_of_Contigs=17; )
TP53RK location ⇒ 17:30142391-30142328   CU459108,CH242-277K1,17:30124939-30186999
(Clone quality: bE277K1 on chr=17; Num_of_Contigs=2; )
TP53RK location ⇒ 17:50969480-50969696   CU640476,CH242-377A5,17:50965070-50972897
(Clone quality: bE377A5 on chr=17; Num_of_Contigs=17; )
TP53RK location ⇒ 17:50971533-50972037   CU640476,CH242-377A5,17:50965070-50972897
(Clone quality: bE377A5 on chr=17; Num_of_Contigs=17; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-1450, 1451-1500, 1501-1550, 1551-1600, 1601-1650, 1651-1700, 1701-1750, 1751-1800, 1801-1850, 1851-8

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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