A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
DCLK3   ENSSSCG00000011241 13:18184304-18216816    
DCLRE1A   ENSSSCG00000010644 14:130015770-130032532   CU424456,CH242-517O6,14:130012066-130163809
(Clone quality: bE517O6 on chr=14; Num_of_Contigs=4; )
DCLRE1B   ENSSSCG00000006761 4:111006291-111012949   CU651648,CH242-226J22,4:110972280-111079200
(Clone quality: bE226J22 on chr=4; Num_of_Contigs=4; )
DCLRE1C ENSSSCG00000011049 10:44596049-44640048   CU929591,CH242-21K12,10:44569457-44680253
(Clone quality: bE21K12 on chr=10; Num_of_Contigs=3; )
DCLRE1C location ⇒ 10:44625117-44624495   CU929591,CH242-21K12,10:44569457-44680253
(Clone quality: bE21K12 on chr=10; Num_of_Contigs=3; )
DCLRE1C location ⇒ 10:44628217-44628165   CU929591,CH242-21K12,10:44569457-44680253
(Clone quality: bE21K12 on chr=10; Num_of_Contigs=3; )
DCLRE1C location ⇒ 10:44640048-44639894   CU929591,CH242-21K12,10:44569457-44680253
(Clone quality: bE21K12 on chr=10; Num_of_Contigs=3; )
DCN ENSSSCG00000000915 5:86735745-86770166    
DCNP1 location ⇒ 2:125091965-125092034   CU639478,CH242-160M23,2:125087522-125092734
(Clone quality: bE160M23 on chr=2; Num_of_Contigs=23; )
DCP1B   ENSSSCG00000000762 5:64695943-64700508    
DCP2   ENSSSCG00000014204 2:105369410-105531515    
DCPS   ENSSSCG00000015231 9:51767917-51804512    
DCST1   ENSSSCG00000006534 4:98826333-98832103   CU207227,CH242-365J2,4:98805490-98833519
(Clone quality: bE365J2 on chr=4; Num_of_Contigs=9; )
DCST2   ENSSSCG00000006541 4:98945008-98957691    
DCSTAMP location ⇒ 4:33222059-33221701   CU407249,CH242-439E22,4:33220861-33230984
(Clone quality: bE439E22 on chr=4; Num_of_Contigs=12; )
DCSTAMP location ⇒ 4:33223481-33223177   CU407249,CH242-439E22,4:33220861-33230984
(Clone quality: bE439E22 on chr=4; Num_of_Contigs=12; )
DCSTAMP location ⇒ 4:33228109-33227067   CU407249,CH242-439E22,4:33220861-33230984
(Clone quality: bE439E22 on chr=4; Num_of_Contigs=12; )
DCT   ENSSSCG00000009490 11:64161332-64208422    
DCTD   ENSSSCG00000015775 15:41707302-41732255   CU466426,CH242-113E21,15:41688529-41747054
(Clone quality: bE113E21 on chr=15; Num_of_Contigs=4; )
DCTN3 ENSSSCG00000010972 10:30624995-30631685   CU928717,CH242-142N10,10:30613639-30641888
(Clone quality: bE142N10 on chr=10; Num_of_Contigs=7; )
DCTN3 location ⇒ 10:30627071-30627157   CU928717,CH242-142N10,10:30613639-30641888
(Clone quality: bE142N10 on chr=10; Num_of_Contigs=7; )
DCTN3 location ⇒ 10:30627840-30627926   CU928717,CH242-142N10,10:30613639-30641888
(Clone quality: bE142N10 on chr=10; Num_of_Contigs=7; )
DCTN3 location ⇒ 10:30629473-30629559   CU928717,CH242-142N10,10:30613639-30641888
(Clone quality: bE142N10 on chr=10; Num_of_Contigs=7; )
DCTN3 location ⇒ 10:30631376-30631483   CU928717,CH242-142N10,10:30613639-30641888
(Clone quality: bE142N10 on chr=10; Num_of_Contigs=7; )
DCTN5   ENSSSCG00000010793 10:4170-17188   CU929008,CH242-207N16,10:1-36781
(Clone quality: bE207N16 on chr=10; Num_of_Contigs=6; )
DCTN6   ENSSSCG00000015848 15:51898377-51898472   CU466337,CH242-87K22,15:51898283-51901226
(Clone quality: bE87K22 on chr=15; Num_of_Contigs=10; )
DCTPP1   ENSSSCG00000007796 3:16477714-16481604   CU928725,CH242-25P12,3:16471690-16481606
(Clone quality: bE25P12 on chr=3; Num_of_Contigs=8; )
DCUN1D1   ENSSSCG00000011774 13:91937212-91951716   CU633404,CH242-341M18,13:91936763-91952055
(Clone quality: bE341M18 on chr=13; Num_of_Contigs=9; )
DCUN1D3   ENSSSCG00000007854 3:22801954-22804704   CU464004,CH242-258J5,3:22788816-22807394
(Clone quality: bE258J5 on chr=3; Num_of_Contigs=7; )
DCUN1D4   ENSSSCG00000008831 8:33534818-33620220    
DCUN1D5   ENSSSCG00000014989 9:33326746-33355820    
DCX   ENSSSCG00000012585 X:89224518-89343054    
DDAH1   ENSSSCG00000006941 4:135542412-135577220   CU179752,CH242-138E14,4:135457241-135636067
(Clone quality: bE138E14 on chr=4; Num_of_Contigs=3; )
DDB1   ENSSSCG00000013094 2:8643082-8673628    
DDB2   ENSSSCG00000013243 2:13366565-13392826   CU469364,CH242-119B4,2:13316728-13478061
(Clone quality: bE119B4 on chr=2; Num_of_Contigs=2; )
DDC   ENSSSCG00000015630 9:128434077-128459258    
DDHD1   ENSSSCG00000005043 1:191131250-191215125    
DDHD2   ENSSSCG00000015818 15:45787298-45824613    
DDI1   ENSSSCG00000014995 9:34118276-34119481   FP102678,CH242-322C19,9:34109494-34129935
(Clone quality: bE322C19 on chr=9; Num_of_Contigs=10; )
DDI2   ENSSSCG00000003462 6:51300759-51331863    
DDIT3 ENSSSCG00000000432 5:21618578-21619286   CU896550,CH242-139E23,5:21612989-21627956
(Clone quality: bE139E23 on chr=5; Num_of_Contigs=9; )
DDIT4   ENSSSCG00000010287 14:78345537-78347197   CU607002,CH242-299J16,14:78303074-78368436
(Clone quality: bE299J16 on chr=14; Num_of_Contigs=5; )
DDIT4L   ENSSSCG00000009174 8:103112672-103117279   CU694707,CH242-2H24,8:103098299-103122064
(Clone quality: bE2H24 on chr=8; Num_of_Contigs=4; )
DDN   ENSSSCG00000000184 5:13651257-13653784   CU928246,CH242-133O18,5:13649873-13683519
(Clone quality: bE133O18 on chr=5; Num_of_Contigs=7; )
DDOST ENSSSCG00000003505 6:54203147-54213668   FP243370,CH242-400E6,6:54195076-54224916
(Clone quality: bE400E6 on chr=6; Num_of_Contigs=4; )
DDR1 ENSSSCG00000001382 7:27331121-27348440 CT971577,CH242-239H1,7:27216113-27394697
(Clone quality: bE239H1 on chr=7; Num_of_Contigs=1; ) 		 
DDR2 ENSSSCG00000006338 4:91510539-91665778    
DDR2 location ⇒ 4:91526179-91526126   CU582912,CH242-19H12,4:91483054-91606104
(Clone quality: bE19H12 on chr=4; Num_of_Contigs=2; )
DDR2 location ⇒ 4:91527059-91526994   CU582912,CH242-19H12,4:91483054-91606104
(Clone quality: bE19H12 on chr=4; Num_of_Contigs=2; )
DDR2 location ⇒ 4:91530643-91530398   CU582912,CH242-19H12,4:91483054-91606104
(Clone quality: bE19H12 on chr=4; Num_of_Contigs=2; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-16

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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