A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
SNORD73   ENSSSCG00000018727 8:66993683-66993752   FP016091,CH242-139K9,8:66992670-66997386
(Clone quality: bE139K9 on chr=8; Num_of_Contigs=7; )
SNORD73   ENSSSCG00000019266 3:33998662-33998731   FP236154,CH242-89E20,3:33995428-33998975
(Clone quality: bE89E20 on chr=3; Num_of_Contigs=31; )
SNORD74   ENSSSCG00000018229 9:108990370-108990447   FP102036,CH242-81O13,9:108983229-109007427
(Clone quality: bE81O13 on chr=9; Num_of_Contigs=6; )
SNORD75   ENSSSCG00000019810 9:108990957-108991018   FP102036,CH242-81O13,9:108983229-109007427
(Clone quality: bE81O13 on chr=9; Num_of_Contigs=6; )
SNORD77   ENSSSCG00000018592 X:62817188-62817258   CU633239,CH242-202B2,X:62781076-62825209
(Clone quality: bE202B2 on chr=X; Num_of_Contigs=5; )
SNORD77   ENSSSCG00000018942 9:108991539-108991604   FP102036,CH242-81O13,9:108983229-109007427
(Clone quality: bE81O13 on chr=9; Num_of_Contigs=6; )
SNORD78   ENSSSCG00000019069 9:108992198-108992262   FP102036,CH242-81O13,9:108983229-109007427
(Clone quality: bE81O13 on chr=9; Num_of_Contigs=6; )
SNORD79   ENSSSCG00000018333 9:108992595-108992676   FP102036,CH242-81O13,9:108983229-109007427
(Clone quality: bE81O13 on chr=9; Num_of_Contigs=6; )
SNORD81   ENSSSCG00000018158 9:108993772-108993850   FP102036,CH242-81O13,9:108983229-109007427
(Clone quality: bE81O13 on chr=9; Num_of_Contigs=6; )
SNORD83   ENSSSCG00000018494 7:27622886-27622962 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
SNORD83   ENSSSCG00000019780 7:27627014-27627091 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
SNORD86   ENSSSCG00000018372 17:34572871-34572956   CU633588,CH242-437B5,17:34555708-34575692
(Clone quality: bE437B5 on chr=17; Num_of_Contigs=9; )
SNORD87   ENSSSCG00000018868 4:70340821-70340909   CU582915,CH242-248L23,4:70311836-70404178
(Clone quality: bE248L23 on chr=4; Num_of_Contigs=6; )
SNORD89   ENSSSCG00000018864 3:48737840-48737949   CU407202,CH242-326N21,3:48736687-48739827
(Clone quality: bE326N21 on chr=3; Num_of_Contigs=9; )
SNORD90   ENSSSCG00000018665 1:278293854-278293964   CU075436,CH242-173A3,1:278277548-278303896
(Clone quality: bE173A3 on chr=1; Num_of_Contigs=10; )
SNORD91   ENSSSCG00000018198 12:45859461-45859554   CU640470,CH242-300A22,12:45800890-45898822
(Clone quality: bE300A22 on chr=12; Num_of_Contigs=5; )
SNORD91   ENSSSCG00000018355 12:45860294-45860386   CU640470,CH242-300A22,12:45800890-45898822
(Clone quality: bE300A22 on chr=12; Num_of_Contigs=5; )
SNORD91   ENSSSCG00000018632 15:120156266-120156356   CU929201,CH242-281K18,15:120145045-120194601
(Clone quality: bE281K18 on chr=15; Num_of_Contigs=2; )
SNORD92   ENSSSCG00000018548 3:103335704-103335791   CU915390,CH242-227M18,3:103328642-103341107
(Clone quality: bE227M18 on chr=3; Num_of_Contigs=14; )
SNORD93   ENSSSCG00000019224 9:85764702-85764775   FP102180,CH242-221J19,9:85755524-85769707
(Clone quality: bE221J19 on chr=9; Num_of_Contigs=8; )
SNORD94   ENSSSCG00000019715 3:53544417-53544551   CU570839,CH242-286N20,3:53540211-53717808
(Clone quality: bE286N20 on chr=3; Num_of_Contigs=1; )
SNORD98   ENSSSCG00000019122 14:74878550-74878614   CT990630,CH242-252D18,14:74871228-74924418
(Clone quality: bE252D18 on chr=14; Num_of_Contigs=6; )
SNORD98   ENSSSCG00000019677 14:74983881-74983945   CU407004,CH242-94B14,14:74933928-74989402
(Clone quality: bE94B14 on chr=14; Num_of_Contigs=6; )
SNORD99   ENSSSCG00000018098 3:102062803-102062872   CU942392,CH242-190K15,3:102051021-102076371
(Clone quality: bE190K15 on chr=3; Num_of_Contigs=7; )
SNORND104   ENSSSCG00000019194 12:12437386-12437454   CU694679,CH242-184I12,12:12432127-12461975
(Clone quality: bE184I12 on chr=12; Num_of_Contigs=5; )
snosnR60_Z15   ENSSSCG00000019755 9:108992847-108992929   FP102036,CH242-81O13,9:108983229-109007427
(Clone quality: bE81O13 on chr=9; Num_of_Contigs=6; )
snoU105B   ENSSSCG00000019956 2:53399393-53399472   CU462940,CH242-319N14,2:53390856-53454909
(Clone quality: bE319N14 on chr=2; Num_of_Contigs=3; )
snoU109   ENSSSCG00000018205 2:80748460-80748595   CU856406,CH242-350K7,2:80624554-80768859
(Clone quality: bE350K7 on chr=2; Num_of_Contigs=2; )
snoU13   ENSSSCG00000019433 7:87714603-87714706   CU468320,CH242-18H12,7:87699120-87724551
(Clone quality: bE18H12 on chr=7; Num_of_Contigs=4; )
snoU13   ENSSSCG00000019514 4:36308748-36308851   CU407183,CH242-266N20,4:36274943-36309184
(Clone quality: bE266N20 on chr=4; Num_of_Contigs=7; )
snoU13   ENSSSCG00000019774 14:102912705-102912806   CU468623,CH242-219H10,14:102891415-102925184
(Clone quality: bE219H10 on chr=14; Num_of_Contigs=6; )
snoU13   ENSSSCG00000019973 6:45600619-45600724   FP102449,CH242-60I1,6:45583638-45607326
(Clone quality: bE60I1 on chr=6; Num_of_Contigs=6; )
snoU13   ENSSSCG00000019991 13:66601791-66601893   CU928256,CH242-512L19,13:66585655-66604897
(Clone quality: bE512L19 on chr=13; Num_of_Contigs=3; )
snoU13   ENSSSCG00000019996 8:86585392-86585495   CU627982,CH242-25A12,8:86584605-86587636
(Clone quality: bE25A12 on chr=8; Num_of_Contigs=11; )
snoU13   ENSSSCG00000020003 16:57345460-57345563   CU929542,CH242-475C5,16:57313335-57468767
(Clone quality: bE475C5 on chr=16; Num_of_Contigs=4; )
snoU13   ENSSSCG00000020006 5:4066104-4066206   CU695189,CH242-308G14,5:4063910-4066564
(Clone quality: bE308G14 on chr=5; Num_of_Contigs=9; )
snoU13   ENSSSCG00000019227 6:12187593-12187695   FP102513,CH242-97F24,6:12184989-12196005
(Clone quality: bE97F24 on chr=6; Num_of_Contigs=5; )
snoU13   ENSSSCG00000019106 1:147188266-147188369   CU407245,CH242-429L12,1:147187339-147199556
(Clone quality: bE429L12 on chr=1; Num_of_Contigs=13; )
snoU13   ENSSSCG00000018140 X:90629468-90629571 CU207356,CH242-412O5,X:90618270-90646573
(Clone quality: bE412O5 on chr=X; Num_of_Contigs=3; ) 		 
snoU13   ENSSSCG00000018273 3:83530981-83531091   CU467897,CH242-361P2,3:83518801-83539790
(Clone quality: bE361P2 on chr=3; Num_of_Contigs=2; )
snoU13   ENSSSCG00000018378 15:49336638-49336741   FP102412,CH242-94A16,15:49335344-49377400
(Clone quality: bE94A16 on chr=15; Num_of_Contigs=2; )
snoU13   ENSSSCG00000018408 16:57155655-57155758   FP236479,CH242-149C3,16:57146325-57182689
(Clone quality: bE149C3 on chr=16; Num_of_Contigs=15; )
snoU13   ENSSSCG00000018638 1:183647253-183647360   CU606875,CH242-311M23,1:183600731-183657618
(Clone quality: bE311M23 on chr=1; Num_of_Contigs=5; )
snoU13   ENSSSCG00000018831 12:41137961-41138064   FP016089,CH242-119K20,12:41087006-41148176
(Clone quality: bE119K20 on chr=12; Num_of_Contigs=5; )
snoU13   ENSSSCG00000018846 1:116753743-116753845   CU464072,CH242-235P3,1:116746177-116758203
(Clone quality: bE235P3 on chr=1; Num_of_Contigs=4; )
snoU13   ENSSSCG00000018872 1:140013416-140013519   CU302355,CH242-289C11,1:139924696-140125159
(Clone quality: bE289C11 on chr=1; Num_of_Contigs=1; )
snoU2-25   ENSSSCG00000018682 4:115465291-115465700   CU207233,CH242-432M23,4:115446550-115504367
(Clone quality: bE432M23 on chr=4; Num_of_Contigs=7; )
snoU2-30   ENSSSCG00000018280 9:26400312-26400375   CU694898,CH242-364L8,9:26392035-26401420
(Clone quality: bE364L8 on chr=9; Num_of_Contigs=25; )
snoU2_19   ENSSSCG00000018303 9:26400525-26400604   CU694898,CH242-364L8,9:26392035-26401420
(Clone quality: bE364L8 on chr=9; Num_of_Contigs=25; )
snoU54   ENSSSCG00000018353 4:78657607-78657671   CU407092,CH242-518H24,4:78579444-78680435
(Clone quality: bE518H24 on chr=4; Num_of_Contigs=5; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-1450, 1451-1500, 1501-1550, 1551-1600, 1601-1650, 1651-1700, 1701-1750, 1751-1800, 1801-1850, 1851-1900, 1901-1950, 1951-2000, 2001-2050, 2051-2100, 2101-2150, 2151-2200, 2201-2250, 2251-2300, 2301-2350, 2351-2400, 2401-2450, 2451-2500, 2501-2550, 2551-2600, 2601-16

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team