A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
DEDD ENSSSCG00000006364 4:92819965-92831285    
DEDD location ⇒ 4:92829215-92829397   CU463216,CH242-293N2,4:92828593-92858602
(Clone quality: bE293N2 on chr=4; Num_of_Contigs=6; )
DEDD location ⇒ 4:92829597-92829705   CU463216,CH242-293N2,4:92828593-92858602
(Clone quality: bE293N2 on chr=4; Num_of_Contigs=6; )
DEDD location ⇒ 4:92830014-92830163   CU463216,CH242-293N2,4:92828593-92858602
(Clone quality: bE293N2 on chr=4; Num_of_Contigs=6; )
DEDD location ⇒ 4:92830782-92831144   CU463216,CH242-293N2,4:92828593-92858602
(Clone quality: bE293N2 on chr=4; Num_of_Contigs=6; )
DEDD2 ENSSSCG00000003036 6:34391771-34407110    
DEF6 ENSSSCG00000001538 7:35706291-35728654   CU571051,CH242-525J6,7:35686365-35735821
(Clone quality: bE525J6 on chr=7; Num_of_Contigs=14; )
DEF6 location ⇒ 7:35706297-35706392   CU571051,CH242-525J6,7:35686365-35735821
(Clone quality: bE525J6 on chr=7; Num_of_Contigs=14; )
DEF6 location ⇒ 7:35716527-35716673   CU571051,CH242-525J6,7:35686365-35735821
(Clone quality: bE525J6 on chr=7; Num_of_Contigs=14; )
DEF6 location ⇒ 7:35717268-35717458   CU571051,CH242-525J6,7:35686365-35735821
(Clone quality: bE525J6 on chr=7; Num_of_Contigs=14; )
DEF6 location ⇒ 7:35719088-35719169   CU571051,CH242-525J6,7:35686365-35735821
(Clone quality: bE525J6 on chr=7; Num_of_Contigs=14; )
DEF8   ENSSSCG00000002640 6:178404-182210   FP102308,CH242-96G18,6:178339-183803
(Clone quality: bE96G18 on chr=6; Num_of_Contigs=17; )
DEFB104 location ⇒ 15:35048870-35048720   FP102601,CH242-177B1,15:35048496-35053017
(Clone quality: bE177B1 on chr=15; Num_of_Contigs=8; )
DEFB108 location ⇒ 17:37137010-37137447   CU442750,CH242-513N11,17:37124171-37139515
(Clone quality: bE513N11 on chr=17; Num_of_Contigs=4; )
DEFB108 location ⇒ 17:37137041-37137447   CU442750,CH242-513N11,17:37124171-37139515
(Clone quality: bE513N11 on chr=17; Num_of_Contigs=4; )
DEFB110   ENSSSCG00000001743 7:51216628-51221217   CU041392,CH242-299J7,7:51188966-51286068
(Clone quality: bE299J7 on chr=7; Num_of_Contigs=2; )
DEFB113   ENSSSCG00000001742 7:51196197-51197104   CU041392,CH242-299J7,7:51188966-51286068
(Clone quality: bE299J7 on chr=7; Num_of_Contigs=2; )
DEFB114 ENSSSCG00000001741 7:51180874-51190079    
DEFB114 location ⇒ 7:51181586-51180860   CU041392,CH242-299J7,7:51150415-51188865
(Clone quality: bE299J7 on chr=7; Num_of_Contigs=2; )
DEFB114 location ⇒ 7:51181586-51180903   CU041392,CH242-299J7,7:51150415-51188865
(Clone quality: bE299J7 on chr=7; Num_of_Contigs=2; )
DEFB114 location ⇒ 7:51190079-51189991   CU041392,CH242-299J7,7:51188966-51286068
(Clone quality: bE299J7 on chr=7; Num_of_Contigs=2; )
DEFB114 location ⇒ 7:51190079-51189991   CU041392,CH242-299J7,7:51188966-51286068
(Clone quality: bE299J7 on chr=7; Num_of_Contigs=2; )
DEFB115   ENSSSCG00000007216 17:36921312-36923295   CU627978,CH242-215N2,17:36914974-36928001
(Clone quality: bE215N2 on chr=17; Num_of_Contigs=24; )
DEFB116   ENSSSCG00000007215 17:36910482-36912904   CU627978,CH242-215N2,17:36907068-36914873
(Clone quality: bE215N2 on chr=17; Num_of_Contigs=24; )
DEFB117   ENSSSCG00000007223 17:37073427-37073552   CU442750,CH242-513N11,17:37068699-37093958
(Clone quality: bE513N11 on chr=17; Num_of_Contigs=4; )
DEFB119 location ⇒ 17:37048688-37048882   CU442750,CH242-513N11,17:37030070-37062035
(Clone quality: bE513N11 on chr=17; Num_of_Contigs=4; )
DEFB119 location ⇒ 17:37048717-37048947   CU442750,CH242-513N11,17:37030070-37062035
(Clone quality: bE513N11 on chr=17; Num_of_Contigs=4; )
DEFB121   ENSSSCG00000007220 17:37024795-37026363   CU442750,CH242-513N11,17:37015359-37029969
(Clone quality: bE513N11 on chr=17; Num_of_Contigs=4; )
DEFB122 location ⇒ 17:37012317-37012475   CU442750,CH242-513N11,17:37008510-37015258
(Clone quality: bE513N11 on chr=17; Num_of_Contigs=4; )
DEFB123 ENSSSCG00000007226 17:37161694-37166942   CU442750,CH242-513N11,17:37148820-37179147
(Clone quality: bE513N11 on chr=17; Num_of_Contigs=4; )
DEFB123 location ⇒ 17:37024795-37024870   CU442750,CH242-513N11,17:37015359-37029969
(Clone quality: bE513N11 on chr=17; Num_of_Contigs=4; )
DEFB123 location ⇒ 17:37025844-37026361   CU442750,CH242-513N11,17:37015359-37029969
(Clone quality: bE513N11 on chr=17; Num_of_Contigs=4; )
DEFB124 ENSSSCG00000007225 17:37148138-37151715    
DEFB124 location ⇒ 17:37151599-37151714   CU442750,CH242-513N11,17:37148820-37179147
(Clone quality: bE513N11 on chr=17; Num_of_Contigs=4; )
DEFB125 ENSSSCG00000007217 17:36941588-36948351   CU627978,CH242-215N2,17:36928102-36952687
(Clone quality: bE215N2 on chr=17; Num_of_Contigs=24; )
DEFB125 location ⇒ 17:36941588-36941677   CU627978,CH242-215N2,17:36928102-36952687
(Clone quality: bE215N2 on chr=17; Num_of_Contigs=24; )
DEFB125 location ⇒ 17:36947658-36948351   CU627978,CH242-215N2,17:36928102-36952687
(Clone quality: bE215N2 on chr=17; Num_of_Contigs=24; )
DEFB127 ENSSSCG00000007213 17:36886309-36886524   CU627978,CH242-215N2,17:36885526-36904318
(Clone quality: bE215N2 on chr=17; Num_of_Contigs=24; )
DEFB127 location ⇒ 17:18839-18766   CU855955,CH242-102E13,17:16852-18996
(Clone quality: bE102E13 on chr=17; Num_of_Contigs=18; )
DEFB127 location ⇒ 17:68903-69012   CU855955,CH242-102E13,17:54868-70432
(Clone quality: bE102E13 on chr=17; Num_of_Contigs=18; )
DEFB127 location ⇒ 17:74474-74405   CU855955,CH242-102E13,17:70533-90503
(Clone quality: bE102E13 on chr=17; Num_of_Contigs=18; )
DEFB127 location ⇒ 17:82201-82290   CU855955,CH242-102E13,17:70533-90503
(Clone quality: bE102E13 on chr=17; Num_of_Contigs=18; )
DEFB128   ENSSSCG00000007214 17:36894964-36896696   CU627978,CH242-215N2,17:36885526-36904318
(Clone quality: bE215N2 on chr=17; Num_of_Contigs=24; )
DEFB129 location ⇒ 17:36728394-36727796   CU606854,CH242-254I19,17:36724988-36731184
(Clone quality: bE254I19 on chr=17; Num_of_Contigs=11; )
DEFB129 location ⇒ 17:36730973-36730900   CU606854,CH242-254I19,17:36724988-36731184
(Clone quality: bE254I19 on chr=17; Num_of_Contigs=11; )
DEFB129 location ⇒ 17:36991802-36991204   CU627978,CH242-215N2,17:36986178-36992890
(Clone quality: bE215N2 on chr=17; Num_of_Contigs=24; )
DEFB129 location ⇒ 17:36993856-36993783   CU627978,CH242-215N2,17:36992991-36995689
(Clone quality: bE215N2 on chr=17; Num_of_Contigs=24; )
DEFB133   ENSSSCG00000001740 7:51169964-51173176   CU041392,CH242-299J7,7:51150415-51188865
(Clone quality: bE299J7 on chr=7; Num_of_Contigs=2; )
DEFB134   ENSSSCG00000009695 14:14697341-14699554   CU582875,CH242-154K5,14:14670173-14880318
(Clone quality: bE154K5 on chr=14; Num_of_Contigs=1; )
DEFB3 location ⇒ 7:66025074-66025101   CU571030,CH242-26L13,7:65973790-66032617
(Clone quality: bE26L13 on chr=7; Num_of_Contigs=6; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-16

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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