A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 1 - 100:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
A1CF   ENSSSCG00000010431 14:103519490-103590115    
A2BP1   ENSSSCG00000007917 3:30842719-31223905    
A2LD1   ENSSSCG00000009523 11:70163766-70164200   CU640422,CH242-387P22,11:70161004-70164885
(Clone quality: bE387P22 on chr=11; Num_of_Contigs=6; )
A2M ENSSSCG00000000660 5:59126715-59171828    
A2ML1   ENSSSCG00000000664 5:59354247-59385516    
AAAS   ENSSSCG00000000268 5:17065522-17077274   CU570852,CH242-3N12,5:17057869-17089247
(Clone quality: bE3N12 on chr=5; Num_of_Contigs=3; )
AACS ENSSSCG00000009755 14:28056494-28095262    
AADACL1   ENSSSCG00000011755 13:84529790-84546739   CU463167,CH242-393A19,13:84415923-84573669
(Clone quality: bE393A19 on chr=13; Num_of_Contigs=1; )
AADACL3   ENSSSCG00000003441 6:49831992-49836197    
AADACL4   ENSSSCG00000003440 6:49784723-49799577   FP103049,CH242-116I16,6:49765010-49832358
(Clone quality: bE116I16 on chr=6; Num_of_Contigs=3; )
AADAT   ENSSSCG00000009708 14:19523625-19546705   CU468423,CH242-384M2,14:19517521-19581529
(Clone quality: bE384M2 on chr=14; Num_of_Contigs=3; )
AAGAB ENSSSCG00000004951 1:172292133-172329373   FP236622,CH242-20C24,1:172287897-172330881
(Clone quality: bE20C24 on chr=1; Num_of_Contigs=3; )
AAK1   ENSSSCG00000008337 3:66805405-66889135    
AAMP ENSSSCG00000016189 15:113553539-113558290    
AANAT   ENSSSCG00000017176 12:3263364-3264545   CU928356,CH242-33I18,12:3255856-3269726
(Clone quality: bE33I18 on chr=12; Num_of_Contigs=10; )
AARS   ENSSSCG00000002723 6:9727150-9747183   CU929739,CH242-254K22,6:9727133-9749687
(Clone quality: bE254K22 on chr=6; Num_of_Contigs=9; )
AARS2   ENSSSCG00000001706 7:45822827-45835219 CT009542,CH242-272H8,7:45714746-45890644
(Clone quality: bE272H8 on chr=7; Num_of_Contigs=13; ) 		 
AASDH   ENSSSCG00000008906 8:47339179-47347656    
AASDHPPT   ENSSSCG00000014998 9:35338209-35480815    
AASS   ENSSSCG00000016613 18:23149414-23194976    
AATF ENSSSCG00000017693 12:36781687-36883430    
AATK ENSSSCG00000017141 12:778874-783621   CU993801,CH242-26A11,12:778298-786106
(Clone quality: bE26A11 on chr=12; Num_of_Contigs=7; )
ABAT   ENSSSCG00000007909 3:29888769-30048895    
ABCA1 ENSSSCG00000005423 1:258101320-258262611    
ABCA12   ENSSSCG00000016171 15:110389153-110468709    
ABCA13   ENSSSCG00000015625 9:127213946-127317931    
ABCA3 ENSSSCG00000008051 3:36658058-36830863    
ABCA4   ENSSSCG00000006890 4:127482869-127628484    
ABCA5 ENSSSCG00000017255 12:9472185-9541075    
ABCA6   ENSSSCG00000017256 12:9577504-9619013    
ABCA9   ENSSSCG00000017257 12:9654474-9709707   CU655864,CH242-170C16,12:9594640-9727750
(Clone quality: bE170C16 on chr=12; Num_of_Contigs=4; )
ABCB10   ENSSSCG00000010188 14:62619004-62644400   CU468504,CH242-54G23,14:62610152-62667791
(Clone quality: bE54G23 on chr=14; Num_of_Contigs=3; )
ABCB6   ENSSSCG00000016210 15:114242170-114250020   CU457453,CH242-470M7,15:114242050-114256523
(Clone quality: bE470M7 on chr=15; Num_of_Contigs=11; )
ABCB7 ENSSSCG00000012424 X:59586167-59712452    
ABCB9 ENSSSCG00000009784 14:29985305-30010304    
ABCC1 ENSSSCG00000007874 3:25657262-25744405    
ABCC10   ENSSSCG00000001680 7:44661255-44816825    
ABCC2 ENSSSCG00000010543 14:115716020-115793964    
ABCC8   ENSSSCG00000013378 2:38991417-39078510    
ABCC9 ENSSSCG00000000571 5:49451970-49495319    
ABCD2   ENSSSCG00000000781 5:66991160-67127430    
ABCE1 ENSSSCG00000009043 8:71941578-71990160    
ABCF1 ENSSSCG00000001346 7:26680608-26697722 CU498826,CH242-119D24,7:26553813-26728014
(Clone quality: bE119D24 on chr=7; Num_of_Contigs=31; ) 		 
ABCF1 ENSSSCG00000001370 7:27049238-27066960 CU326403,CH242-198M20,7:26882096-27123407
(Clone quality: bE198M20 on chr=7; Num_of_Contigs=9; ) 		 
ABCF2   ENSSSCG00000016441 18:5212154-5217819   FP102583,CH242-165F21,18:5207145-5218026
(Clone quality: bE165F21 on chr=18; Num_of_Contigs=16; )
ABCG2 ENSSSCG00000009213 8:112296288-112514103    
ABCG2 ENSSSCG00000009215 8:112366445-112459036    
ABCG4   ENSSSCG00000015113 9:44978279-44991351   CU639481,CH242-263G17,9:44899832-45096295
(Clone quality: bE263G17 on chr=9; Num_of_Contigs=2; )
ABHD1   ENSSSCG00000008554 3:104432464-104438369   CU896571,CH242-143O19,3:104398046-104492436
(Clone quality: bE143O19 on chr=3; Num_of_Contigs=6; )
ABHD11   ENSSSCG00000007715 3:9321979-9324894    
ABHD12B   ENSSSCG00000005023 1:188912051-188937708    
ABHD13   ENSSSCG00000009541 11:76012439-76013449   CU019584,CH242-370B14,11:75986969-76035774
(Clone quality: bE370B14 on chr=11; Num_of_Contigs=3; )
ABHD15   ENSSSCG00000017789 12:43481311-43485261   CU463822,CH242-488A20,12:43480158-43486368
(Clone quality: bE488A20 on chr=12; Num_of_Contigs=10; )
ABHD2   ENSSSCG00000001835 7:60042575-60170498    
ABHD4   ENSSSCG00000002051 7:82719922-82734065   CU407030,CH242-171E18,7:82670262-82752637
(Clone quality: bE171E18 on chr=7; Num_of_Contigs=3; )
ABHD5   ENSSSCG00000011297 13:22891589-22939546   CU633675,CH242-240D16,13:22788279-22941451
(Clone quality: bE240D16 on chr=13; Num_of_Contigs=1; )
ABHD6   ENSSSCG00000011470 13:33544890-33687465    
ABI1 ENSSSCG00000011062 10:46887977-46960945    
ABI3BP   ENSSSCG00000011959 13:116121170-116348369    
ABL1 ENSSSCG00000003705 6:73661712-73753577    
ABL1 ENSSSCG00000005706 1:286004464-286034610 FP102068,CH242-374C22,1:285992963-286044374
(Clone quality: bE374C22 on chr=1; Num_of_Contigs=5; ) 		 
ABL1 ENSSSCG00000007540 17:64006676-64018123    
ABLIM1   ENSSSCG00000010651 14:130633369-130884957    
ABLIM2   ENSSSCG00000008721 8:3328575-3421471    
ABLIM3   ENSSSCG00000014430 2:135827897-135870723   CU694929,CH242-55J13,2:135825933-135930083
(Clone quality: bE55J13 on chr=2; Num_of_Contigs=3; )
ABP1 ENSSSCG00000016442 18:5244782-5248729   CU928555,CH242-184M19,18:5235311-5256667
(Clone quality: bE184M19 on chr=18; Num_of_Contigs=14; )
ABR   ENSSSCG00000017804 12:44843150-44890085    
ABRA   ENSSSCG00000006036 4:30787333-30794625   CU462955,CH242-373C6,4:30733654-30853606
(Clone quality: bE373C6 on chr=4; Num_of_Contigs=7; )
ABTB2   ENSSSCG00000013303 2:25003850-25189973    
ACA64   ENSSSCG00000018653 15:83204497-83204622   CU570843,CH242-321B10,15:83204369-83211359
(Clone quality: bE321B10 on chr=15; Num_of_Contigs=11; )
ACAA1   ENSSSCG00000011250 13:18896001-18906667    
ACAA2   ENSSSCG00000004510 1:102229469-102256875    
ACACA   ENSSSCG00000017694 12:36903467-37096675    
ACACB ENSSSCG00000009937 14:41867283-41945291    
ACAD10   ENSSSCG00000009836 14:32892949-32941626   CU468489,CH242-352L7,14:32836937-32998018
(Clone quality: bE352L7 on chr=14; Num_of_Contigs=2; )
ACAD11   ENSSSCG00000011629 13:60544792-60643250    
ACAD8   ENSSSCG00000015260 9:59348533-59373070    
ACADL   ENSSSCG00000016156 15:106120893-106154956    
ACADM   ENSSSCG00000003776 6:96130623-96164860   CU929611,CH242-276C23,6:96098364-96199408
(Clone quality: bE276C23 on chr=6; Num_of_Contigs=3; )
ACADS   ENSSSCG00000009916 14:40706674-40720741   CT737144,CH242-18L22,14:40692567-40877957
(Clone quality: bE18L22 on chr=14; Num_of_Contigs=1; )
ACADSB   ENSSSCG00000010723 14:139006971-139047603    
ACADVL   ENSSSCG00000017947 12:49872036-49876082   CU681851,CH242-516E15,12:49872001-49878895
(Clone quality: bE516E15 on chr=12; Num_of_Contigs=27; )
ACAN ENSSSCG00000001832 7:59854877-59894917    
ACAP1   ENSSSCG00000017943 12:49820059-49826476    
ACAP3   ENSSSCG00000003329 6:42778073-42787515    
ACAT2   ENSSSCG00000004049 1:8727925-8740135    
ACBD4   ENSSSCG00000017337 12:16139846-16146559   FP067380,CH242-32K16,12:15988019-16156790
(Clone quality: bE32K16 on chr=12; Num_of_Contigs=1; )
ACBD6   ENSSSCG00000015534 9:114191734-114545229    
ACCN1   ENSSSCG00000017725 12:39413254-39601392    
ACCN2   ENSSSCG00000000216 5:14686975-14694951    
ACCN5   ENSSSCG00000008869 8:38781777-38809575   CU855637,CH242-199L13,8:38712595-38842897
(Clone quality: bE199L13 on chr=8; Num_of_Contigs=2; )
ACCS   ENSSSCG00000013282 2:16814484-16832999   CU457486,CH242-12J14,2:16813439-16854641
(Clone quality: bE12J14 on chr=2; Num_of_Contigs=7; )
ACCSL   ENSSSCG00000013283 2:16837215-16847439   CU457486,CH242-12J14,2:16813439-16854641
(Clone quality: bE12J14 on chr=2; Num_of_Contigs=7; )
ACE ENSSSCG00000017296 12:12979813-12999627   CU929939,CH242-45G1,12:12949494-13027836
(Clone quality: bE45G1 on chr=12; Num_of_Contigs=5; )
ACE2 ENSSSCG00000012138 X:11368440-11416356    
ACER2   ENSSSCG00000005168 1:212236032-212262012    
ACER3   ENSSSCG00000014873 9:10953182-10979185   FP089538,CH242-169J5,9:10941070-10981181
(Clone quality: bE169J5 on chr=9; Num_of_Contigs=5; )
ACIN1 ENSSSCG00000002034 7:82318411-82356240    
ACLY   ENSSSCG00000017421 12:18557550-18601933    
ACMSD   ENSSSCG00000015699 15:15463454-15504357    
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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