A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 23401 - 23500:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
USP18 location ⇒ 5:66010992-66010791   CU914454,CH242-45H20,5:66007355-66013978
(Clone quality: bE45H20 on chr=5; Num_of_Contigs=14; )
USP18 location ⇒ 5:66011381-66011049   CU914454,CH242-45H20,5:66007355-66013978
(Clone quality: bE45H20 on chr=5; Num_of_Contigs=14; )
USP18 location ⇒ 5:66014791-66014621   CU914454,CH242-45H20,5:66014079-66022901
(Clone quality: bE45H20 on chr=5; Num_of_Contigs=14; )
USP2 location ⇒ 9:45174354-45174196   CU915638,CH242-115L13,9:45168416-45215016
(Clone quality: bE115L13 on chr=9; Num_of_Contigs=6; )
USP2 location ⇒ 9:45180861-45180481   CU915638,CH242-115L13,9:45168416-45215016
(Clone quality: bE115L13 on chr=9; Num_of_Contigs=6; )
USP2 location ⇒ 9:45266353-45266195   CU951455,CH242-416J8,9:45248065-45272580
(Clone quality: bE416J8 on chr=9; Num_of_Contigs=2; )
USP2 location ⇒ 9:45272900-45272683   CU951455,CH242-416J8,9:45272681-45278375
(Clone quality: bE416J8 on chr=9; Num_of_Contigs=2; )
USP25 location ⇒ 9:40415590-40415540   CU929720,CH242-221O2,9:40411301-40428460
(Clone quality: bE221O2 on chr=9; Num_of_Contigs=7; )
UTP6 location ⇒ 12:40849811-40849991   FP089481,CH242-212P22,12:40732922-40899579
(Clone quality: bE212P22 on chr=12; Num_of_Contigs=1; )
UTP6 location ⇒ 12:40855261-40855354   FP089481,CH242-212P22,12:40732922-40899579
(Clone quality: bE212P22 on chr=12; Num_of_Contigs=1; )
UTP6 location ⇒ 12:40859039-40859160   FP089481,CH242-212P22,12:40732922-40899579
(Clone quality: bE212P22 on chr=12; Num_of_Contigs=1; )
UTP6 location ⇒ 12:40862343-40862393   FP089481,CH242-212P22,12:40732922-40899579
(Clone quality: bE212P22 on chr=12; Num_of_Contigs=1; )
UTX location ⇒ X:39951865-39951975   CU468333,CH242-231F21,X:39872093-39967050
(Clone quality: bE231F21 on chr=X; Num_of_Contigs=4; )
UTX location ⇒ X:40042400-40042328   FP102540,CH242-107L17,X:40032293-40048687
(Clone quality: bE107L17 on chr=X; Num_of_Contigs=9; )
UTX location ⇒ X:40089849-40089970   FP102540,CH242-107L17,X:40081845-40091384
(Clone quality: bE107L17 on chr=X; Num_of_Contigs=9; )
UTX location ⇒ X:40100772-40100828   FP102540,CH242-107L17,X:40091485-40110606
(Clone quality: bE107L17 on chr=X; Num_of_Contigs=9; )
VAPA location ⇒ 17:61253124-61253192 CR956404,PigE-75D22,17:61204464-61265205
(No clone quality info on bT75D22)
 
VAT1 location ⇒ 14:87688137-87688268   CU694245,CH242-440K10,14:87663357-87802824
(Clone quality: bE440K10 on chr=14; Num_of_Contigs=1; )
VAT1 location ⇒ 14:87688391-87688451   CU694245,CH242-440K10,14:87663357-87802824
(Clone quality: bE440K10 on chr=14; Num_of_Contigs=1; )
VAV1 location ⇒ 2:50209401-50209557   CU681822,CH242-171H11,2:50148903-50216237
(Clone quality: bE171H11 on chr=2; Num_of_Contigs=13; )
VAV1 location ⇒ 2:50211327-50211636   CU681822,CH242-171H11,2:50148903-50216237
(Clone quality: bE171H11 on chr=2; Num_of_Contigs=13; )
VAV1 location ⇒ 2:50277175-50276960   CU856214,CH242-17I12,2:50262831-50301105
(Clone quality: bE17I12 on chr=2; Num_of_Contigs=13; )
VAV1 location ⇒ 2:50341115-50341424   CU856214,CH242-17I12,2:50305424-50371532
(Clone quality: bE17I12 on chr=2; Num_of_Contigs=13; )
VAV2 location ⇒ 1:288555114-288555012   CU572088,CH242-222B5,1:288550409-288573978
(Clone quality: bE222B5 on chr=1; Num_of_Contigs=9; )
VAV2 location ⇒ 1:288560843-288560597   CU572088,CH242-222B5,1:288550409-288573978
(Clone quality: bE222B5 on chr=1; Num_of_Contigs=9; )
VAV2 location ⇒ 1:289146581-289146529   CU627992,CH242-201C5,1:289145697-289150081
(Clone quality: bE201C5 on chr=1; Num_of_Contigs=12; )
VAV2 location ⇒ 1:289255586-289255832   CU627992,CH242-201C5,1:289252716-289258180
(Clone quality: bE201C5 on chr=1; Num_of_Contigs=12; )
VAV3 location ⇒ 4:116893717-116893871   CU138565,CH242-232L2,4:116883721-116928920
(Clone quality: bE232L2 on chr=4; Num_of_Contigs=13; )
VAV3 location ⇒ 4:116894728-116895715   CU138565,CH242-232L2,4:116883721-116928920
(Clone quality: bE232L2 on chr=4; Num_of_Contigs=13; )
VAV3 location ⇒ 4:116944265-116943281   CU407227,CH242-384O10,4:116933059-116946376
(Clone quality: bE384O10 on chr=4; Num_of_Contigs=14; )
VAV3 location ⇒ 4:116945288-116945134   CU407227,CH242-384O10,4:116933059-116946376
(Clone quality: bE384O10 on chr=4; Num_of_Contigs=14; )
VCAM1 location ⇒ 4:122370179-122369861   CU467566,CH242-347G20,4:122358778-122411545
(Clone quality: bE347G20 on chr=4; Num_of_Contigs=10; )
VCAM1 location ⇒ 4:122370794-122370245   CU467566,CH242-347G20,4:122358778-122411545
(Clone quality: bE347G20 on chr=4; Num_of_Contigs=10; )
VCAM1 location ⇒ 4:122381157-122380846   CU467566,CH242-347G20,4:122358778-122411545
(Clone quality: bE347G20 on chr=4; Num_of_Contigs=10; )
VCAM1 location ⇒ 4:122383457-122383179   CU467566,CH242-347G20,4:122358778-122411545
(Clone quality: bE347G20 on chr=4; Num_of_Contigs=10; )
VCL location ⇒ 14:80090512-80090713   CU468344,CH242-336P14,14:80025525-80096881
(Clone quality: bE336P14 on chr=14; Num_of_Contigs=4; )
VCL location ⇒ 14:80099308-80099616   CU468344,CH242-336P14,14:80096982-80132473
(Clone quality: bE336P14 on chr=14; Num_of_Contigs=4; )
VCL location ⇒ 14:80108269-80108477   CU468344,CH242-336P14,14:80096982-80132473
(Clone quality: bE336P14 on chr=14; Num_of_Contigs=4; )
VCL location ⇒ 14:80111694-80113810   CU468344,CH242-336P14,14:80096982-80132473
(Clone quality: bE336P14 on chr=14; Num_of_Contigs=4; )
VCP location ⇒ 1:246885495-246885141   FP102396,CH242-207N19,1:246822188-246892961
(Clone quality: bE207N19 on chr=1; Num_of_Contigs=1; )
VCP location ⇒ 1:246885799-246885529   FP102396,CH242-207N19,1:246822188-246892961
(Clone quality: bE207N19 on chr=1; Num_of_Contigs=1; )
VCP location ⇒ 1:246888333-246888022   FP102396,CH242-207N19,1:246822188-246892961
(Clone quality: bE207N19 on chr=1; Num_of_Contigs=1; )
VCP location ⇒ 1:246888749-246888534   FP102396,CH242-207N19,1:246822188-246892961
(Clone quality: bE207N19 on chr=1; Num_of_Contigs=1; )
VCPIP1 location ⇒ 4:70609105-70606505   CU694736,CH242-488G24,4:70593364-70620019
(Clone quality: bE488G24 on chr=4; Num_of_Contigs=19; )
VCPIP1 location ⇒ 4:70609480-70609211   CU694736,CH242-488G24,4:70593364-70620019
(Clone quality: bE488G24 on chr=4; Num_of_Contigs=19; )
VCPIP1 location ⇒ 4:70694106-70695802   CU694736,CH242-488G24,4:70682631-70697171
(Clone quality: bE488G24 on chr=4; Num_of_Contigs=19; )
VCPIP1 location ⇒ 4:70695837-70696599   CU694736,CH242-488G24,4:70682631-70697171
(Clone quality: bE488G24 on chr=4; Num_of_Contigs=19; )
VEGFA location ⇒ 7:45065102-45065233   CU633430,CH242-74P4,7:45065024-45069059
(Clone quality: bE74P4 on chr=7; Num_of_Contigs=15; )
VEGFA location ⇒ 7:45219132-45219337 CT009664,CH242-113D8,7:45120002-45302047
(Clone quality: bE113D8 on chr=7; Num_of_Contigs=4; )
 
VEGFA location ⇒ 7:45220142-45220221 CT009664,CH242-113D8,7:45120002-45302047
(Clone quality: bE113D8 on chr=7; Num_of_Contigs=4; )
 
VEGFA location ⇒ 7:45223748-45223879 CT009664,CH242-113D8,7:45120002-45302047
(Clone quality: bE113D8 on chr=7; Num_of_Contigs=4; )
 
VEGFB location ⇒ 2:6257795-6257340   CU861533,CH242-1H13,2:6249822-6260732
(Clone quality: bE1H13 on chr=2; Num_of_Contigs=14; )
VEGFB location ⇒ 2:6258451-6258376   CU861533,CH242-1H13,2:6249822-6260732
(Clone quality: bE1H13 on chr=2; Num_of_Contigs=14; )
VEGFB location ⇒ 2:6258616-6258548   CU861533,CH242-1H13,2:6249822-6260732
(Clone quality: bE1H13 on chr=2; Num_of_Contigs=14; )
VEGFC location ⇒ 15:35992515-35992051   CU855957,CH242-117E11,15:35977438-36022572
(Clone quality: bE117E11 on chr=15; Num_of_Contigs=3; )
VIL2 location ⇒ 1:9520181-9519905   CU570667,CH242-519K4,1:9517083-9533228
(Clone quality: bE519K4 on chr=1; Num_of_Contigs=9; )
VIL2 location ⇒ 1:9521118-9521018   CU570667,CH242-519K4,1:9517083-9533228
(Clone quality: bE519K4 on chr=1; Num_of_Contigs=9; )
VIL2 location ⇒ 1:9585062-9585162   CU498836,CH242-100E21,1:9578701-9588240
(Clone quality: bE100E21 on chr=1; Num_of_Contigs=11; )
VIL2 location ⇒ 1:9585999-9586275   CU498836,CH242-100E21,1:9578701-9588240
(Clone quality: bE100E21 on chr=1; Num_of_Contigs=11; )
VIM location ⇒ 10:41795567-41796254   CU570641,CH242-190K24,10:41776330-41805430
(Clone quality: bE190K24 on chr=10; Num_of_Contigs=3; )
VIM location ⇒ 10:41796877-41796938   CU570641,CH242-190K24,10:41776330-41805430
(Clone quality: bE190K24 on chr=10; Num_of_Contigs=3; )
VIM location ⇒ 10:41801209-41801430   CU570641,CH242-190K24,10:41776330-41805430
(Clone quality: bE190K24 on chr=10; Num_of_Contigs=3; )
VIM location ⇒ 10:41803847-41804211   CU570641,CH242-190K24,10:41776330-41805430
(Clone quality: bE190K24 on chr=10; Num_of_Contigs=3; )
VIP location ⇒ 1:14467182-14467047   CU896687,CH242-127E6,1:14458276-14468679
(Clone quality: bE127E6 on chr=1; Num_of_Contigs=14; )
VIP location ⇒ 1:14556538-14556654   CU468074,CH242-467P9,1:14556017-14567443
(Clone quality: bE467P9 on chr=1; Num_of_Contigs=23; )
VIP location ⇒ 1:14558488-14558603   CU468074,CH242-467P9,1:14556017-14567443
(Clone quality: bE467P9 on chr=1; Num_of_Contigs=23; )
VIP location ⇒ 1:14560373-14560508   CU468074,CH242-467P9,1:14556017-14567443
(Clone quality: bE467P9 on chr=1; Num_of_Contigs=23; )
VIPR1 location ⇒ 13:38383577-38383649   FP236724,CH242-470O1,13:38380123-38389002
(Clone quality: bE470O1 on chr=13; Num_of_Contigs=19; )
VIPR1 location ⇒ 13:42495634-42495562   CU856699,CH242-303A24,13:42454474-42514685
(Clone quality: bE303A24 on chr=13; Num_of_Contigs=5; )
VIPR1 location ⇒ 13:5547551-5547627   CU972467,CH242-419L13,13:5543398-5562050
(Clone quality: bE419L13 on chr=13; Num_of_Contigs=9; )
VIPR1 location ⇒ 13:56698979-56698908   CU915692,CH242-255I14,13:56685271-56721359
(Clone quality: bE255I14 on chr=13; Num_of_Contigs=3; )
VISA location ⇒ 17:33455767-33455265   FP236531,CH242-39P18,17:33454798-33461893
(Clone quality: bE39P18 on chr=17; Num_of_Contigs=7; )
VISA location ⇒ 17:33459837-33459665   FP236531,CH242-39P18,17:33454798-33461893
(Clone quality: bE39P18 on chr=17; Num_of_Contigs=7; )
VISA location ⇒ 17:33461553-33461375   FP236531,CH242-39P18,17:33454798-33461893
(Clone quality: bE39P18 on chr=17; Num_of_Contigs=7; )
VISA location ⇒ 17:33616602-33617059   FP236531,CH242-39P18,17:33616149-33618265
(Clone quality: bE39P18 on chr=17; Num_of_Contigs=7; )
VKORC1 location ⇒ 3:15891280-15891485   CU464163,CH242-418M3,3:15802333-15893853
(Clone quality: bE418M3 on chr=3; Num_of_Contigs=3; )
VKORC1 location ⇒ 3:15892285-15892405   CU464163,CH242-418M3,3:15802333-15893853
(Clone quality: bE418M3 on chr=3; Num_of_Contigs=3; )
VKORC1 location ⇒ 3:15893564-15893838   CU464163,CH242-418M3,3:15802333-15893853
(Clone quality: bE418M3 on chr=3; Num_of_Contigs=3; )
VNN1 location ⇒ 1:126455492-126455388   CU618306,CH242-110E11,1:126436036-126465949
(Clone quality: bE110E11 on chr=1; Num_of_Contigs=16; )
VNN1 location ⇒ 1:126720228-126720332   CU571408,CH242-238O3,1:126712057-126779651
(Clone quality: bE238O3 on chr=1; Num_of_Contigs=8; )
VNN1 location ⇒ 1:142049389-142049457   CU234198,CH242-208D1,1:142032048-142113418
(Clone quality: bE208D1 on chr=1; Num_of_Contigs=3; )
VNN1 location ⇒ 1:32480929-32481037   CU041311,CH242-393L4,1:32405122-32529539
(Clone quality: bE393L4 on chr=1; Num_of_Contigs=2; )
VPREB1 location ⇒ 17:49757408-49757554   CU606851,CH242-219J22,17:49753742-49764208
(Clone quality: bE219J22 on chr=17; Num_of_Contigs=12; )
VPREB1 location ⇒ 17:49760551-49760704   CU606851,CH242-219J22,17:49753742-49764208
(Clone quality: bE219J22 on chr=17; Num_of_Contigs=12; )
VPREB1 location ⇒ 17:49837028-49837181   CU683881,CH242-15E11,17:49835664-49840881
(Clone quality: bE15E11 on chr=17; Num_of_Contigs=8; )
VPREB1 location ⇒ 17:49842452-49842306   CU683881,CH242-15E11,17:49840982-49846217
(Clone quality: bE15E11 on chr=17; Num_of_Contigs=8; )
VPS45A location ⇒ 4:102562482-102562313   CU856122,CH242-64C14,4:102561130-102587241
(Clone quality: bE64C14 on chr=4; Num_of_Contigs=4; )
VPS45A location ⇒ 4:102627657-102627818   CU856122,CH242-64C14,4:102618018-102630769
(Clone quality: bE64C14 on chr=4; Num_of_Contigs=4; )
VPS45A location ⇒ 4:102963132-102962971   CU468404,CH242-257B23,4:102956300-103008917
(Clone quality: bE257B23 on chr=4; Num_of_Contigs=10; )
VPS45A location ⇒ 4:102974224-102974055   CU468404,CH242-257B23,4:102956300-103008917
(Clone quality: bE257B23 on chr=4; Num_of_Contigs=10; )
VSIG1 location ⇒ X:86688235-86688400   CU862054,CH242-32D24,X:86669179-86707732
(Clone quality: bE32D24 on chr=X; Num_of_Contigs=4; )
VSIG1 location ⇒ X:86694585-86694784   CU862054,CH242-32D24,X:86669179-86707732
(Clone quality: bE32D24 on chr=X; Num_of_Contigs=4; )
VSIG1 location ⇒ X:86701458-86701615   CU862054,CH242-32D24,X:86669179-86707732
(Clone quality: bE32D24 on chr=X; Num_of_Contigs=4; )
VSIG1 location ⇒ X:86702003-86702122   CU862054,CH242-32D24,X:86669179-86707732
(Clone quality: bE32D24 on chr=X; Num_of_Contigs=4; )
VSIG2 location ⇒ 9:50436415-50436294   CU640461,CH242-276C18,9:50414361-50466713
(Clone quality: bE276C18 on chr=9; Num_of_Contigs=3; )
VSIG2 location ⇒ 9:50437485-50437326   CU640461,CH242-276C18,9:50414361-50466713
(Clone quality: bE276C18 on chr=9; Num_of_Contigs=3; )
VSIG2 location ⇒ 9:50438513-50438306   CU640461,CH242-276C18,9:50414361-50466713
(Clone quality: bE276C18 on chr=9; Num_of_Contigs=3; )
VSIG2 location ⇒ 9:50439270-50439106   CU640461,CH242-276C18,9:50414361-50466713
(Clone quality: bE276C18 on chr=9; Num_of_Contigs=3; )
VSIG4 location ⇒ X:51228250-51228607   CU550724,CH242-208K6,X:51222677-51231063
(Clone quality: bE208K6 on chr=X; Num_of_Contigs=7; )
VSIG4 location ⇒ X:51241045-51241139   CU550724,CH242-208K6,X:51231164-51247739
(Clone quality: bE208K6 on chr=X; Num_of_Contigs=7; )
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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