A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 6001 - 6100:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
IPCEF1   ENSSSCG00000004072 1:13308055-13361382    
IPMK   ENSSSCG00000010420 14:96960892-96986116    
IPO4   ENSSSCG00000002000 7:81451210-81459574   CT961055,CH242-32K2,7:81442434-81553552
(Clone quality: bE32K2 on chr=7; Num_of_Contigs=2; )
IPO5   ENSSSCG00000009509 11:67997892-68127863    
IPO8   ENSSSCG00000000534 5:42293942-42369897    
IPO9   ENSSSCG00000010916 10:24268829-24296273   CU896694,CH242-111D22,10:24267978-24372745
(Clone quality: bE111D22 on chr=10; Num_of_Contigs=6; )
IPPK   ENSSSCG00000008076 3:37680437-37715420   FP016002,CH242-245P15,3:37670882-37732166
(Clone quality: bE245P15 on chr=3; Num_of_Contigs=9; )
IQCA1   ENSSSCG00000016321 15:128575755-128743094    
IQCB1   ENSSSCG00000011881 13:104224695-104276371   CU694714,CH242-321J16,13:104205510-104351881
(Clone quality: bE321J16 on chr=13; Num_of_Contigs=1; )
IQCC   ENSSSCG00000003610 6:60828960-60831341   FP102820,CH242-217B19,6:60828632-60839730
(Clone quality: bE217B19 on chr=6; Num_of_Contigs=18; )
IQCD   ENSSSCG00000009877 14:39062494-39069827    
IQCE   ENSSSCG00000007568 3:1573074-1610378    
IQCG   ENSSSCG00000011855 13:101294827-101342620 CU694544,CH242-123C16,13:101156837-101363233
(Clone quality: bE123C16 on chr=13; Num_of_Contigs=6; ) 		 
IQCH   ENSSSCG00000004953 1:172527891-172706294    
IQCK   ENSSSCG00000007863 3:23577500-23625945    
IQGAP1 ENSSSCG00000001814 7:58750347-58775745    
IQGAP2 ENSSSCG00000014088 2:74411210-74453628    
IQSEC2   ENSSSCG00000012324 X:45430705-45512688    
IQSEC3   ENSSSCG00000000748 5:63339727-63404765   FP102700,CH242-407J15,5:63335661-63418162
(Clone quality: bE407J15 on chr=5; Num_of_Contigs=1; )
IQUB   ENSSSCG00000016608 18:22063004-22112561 CU463288,CH242-205B13,18:21975793-22134892
(Clone quality: bE205B13 on chr=18; Num_of_Contigs=4; ) 		 
IQWD1   ENSSSCG00000006303 4:86199465-86374629    
IRAK1 ENSSSCG00000012795 X:122830457-122837020 CU914490,CH242-115P19,X:122810839-122896667
(Clone quality: bE115P19 on chr=X; Num_of_Contigs=7; ) 		 
IRAK1BP1 ENSSSCG00000004472 1:92067224-92207468    
IRAK2 ENSSSCG00000011570 13:55640311-55806692    
IRAK3 ENSSSCG00000000475 5:30472898-30545160    
IRAK4 ENSSSCG00000000799 5:70919674-70943970   FP102342,PigI-719A6,5:70839195-70984027
(Clone quality: bI719A6 on chr=5; Num_of_Contigs=1; )
IREB2   ENSSSCG00000001756 7:53601966-53649420   CU469426,CH242-238I15,7:53596084-53659833
(Clone quality: bE238I15 on chr=7; Num_of_Contigs=3; )
IRF1 ENSSSCG00000014277 2:122561792-122569263   CU856105,CH242-342E16,2:122542305-122570160
(Clone quality: bE342E16 on chr=2; Num_of_Contigs=9; )
IRF2 ENSSSCG00000003091 6:35976488-35978245   FP102597,CH242-173N22,6:35975320-35989399
(Clone quality: bE173N22 on chr=6; Num_of_Contigs=4; )
IRF2 ENSSSCG00000010159 14:57748954-57750845   CU329680,CH242-226L7,14:57748952-57759381
(Clone quality: bE226L7 on chr=14; Num_of_Contigs=7; )
IRF2 ENSSSCG00000015782 15:42611919-42732447    
IRF2BP1 ENSSSCG00000003091 6:35976488-35978245   FP102597,CH242-173N22,6:35975320-35989399
(Clone quality: bE173N22 on chr=6; Num_of_Contigs=4; )
IRF2BP2 ENSSSCG00000010159 14:57748954-57750845   CU329680,CH242-226L7,14:57748952-57759381
(Clone quality: bE226L7 on chr=14; Num_of_Contigs=7; )
IRF3 ENSSSCG00000003178 6:38190297-38260943    
IRF4 ENSSSCG00000001538 7:35706291-35728654   CU571051,CH242-525J6,7:35686365-35735821
(Clone quality: bE525J6 on chr=7; Num_of_Contigs=14; )
IRF6 ENSSSCG00000015612 9:125517815-125536524   CU855559,CH242-186K8,9:125498250-125543189
(Clone quality: bE186K8 on chr=9; Num_of_Contigs=10; )
IRF7 ENSSSCG00000012853 2:291676-294411    
IRF9 ENSSSCG00000002002 7:81474517-81480486   CT961055,CH242-32K2,7:81442434-81553552
(Clone quality: bE32K2 on chr=7; Num_of_Contigs=2; )
IRG1   ENSSSCG00000009469 11:48023540-48212816    
IRGC   ENSSSCG00000003066 6:35144416-35145807   FP102993,CH242-270O18,6:35142805-35158894
(Clone quality: bE270O18 on chr=6; Num_of_Contigs=6; )
IRGQ   ENSSSCG00000003057 6:34938435-34939754   FP102604,CH242-184P4,6:34931170-34967938
(No clone quality info on )
IRS1   ENSSSCG00000016242 15:120872701-120981690    
IRS4   ENSSSCG00000012577 X:88228629-88230746   FP016024,CH242-477D6,X:88228628-88339199
(Clone quality: bE477D6 on chr=X; Num_of_Contigs=2; )
IRX3   ENSSSCG00000002831 6:21409304-21412025   CU457431,CH242-61D20,6:21404765-21569903
(Clone quality: bE61D20 on chr=6; Num_of_Contigs=1; )
IRX4   ENSSSCG00000017112 16:76471786-76475683   CU640453,CH242-254N17,16:76470419-76487775
(Clone quality: bE254N17 on chr=16; Num_of_Contigs=6; )
IRX6   ENSSSCG00000002830 6:20962508-20966533   CU993806,CH242-396B5,6:20900081-21049414
(Clone quality: bE396B5 on chr=6; Num_of_Contigs=1; )
ISCA1   ENSSSCG00000010953 10:27915331-27930162   CU694299,CH242-250G4,10:27769603-27962750
(Clone quality: bE250G4 on chr=10; Num_of_Contigs=2; )
ISCA2   ENSSSCG00000002367 7:105973931-105975932   CU682356,CH242-154M12,7:105945884-106062639
(Clone quality: bE154M12 on chr=7; Num_of_Contigs=2; )
ISG15 ENSSSCG00000000774 5:66010787-66016098    
ISG15 ENSSSCG00000011209 13:8633044-8723679   CU633903,CH242-265H17,13:8624321-8769900
(Clone quality: bE265H17 on chr=13; Num_of_Contigs=2; )
ISG15 ENSSSCG00000011393 13:27091825-27100758   CU914539,CH242-222N14,13:27078304-27105846
(Clone quality: bE222N14 on chr=13; Num_of_Contigs=2; )
ISG20L1 ENSSSCG00000005102 1:200299368-200305255   FP017226,CH242-131P7,1:200286939-200334734
(Clone quality: bE131P7 on chr=1; Num_of_Contigs=4; )
ISG20L2 ENSSSCG00000006471 4:97059936-97064585   CU582900,CH242-5K23,4:96992487-97070807
(Clone quality: bE5K23 on chr=4; Num_of_Contigs=3; )
ISL1   ENSSSCG00000016883 16:28001106-28011168   CU915536,CH242-107K17,16:27993624-28037723
(Clone quality: bE107K17 on chr=16; Num_of_Contigs=15; )
ISLR ENSSSCG00000001910 7:64777003-64778289 CT797479,CH242-196N13,7:64639731-64852331
(Clone quality: bE196N13 on chr=7; Num_of_Contigs=2; ) 		 
ISLR2   ENSSSCG00000001911 7:64812854-64815094 CT797479,CH242-196N13,7:64639731-64852331
(Clone quality: bE196N13 on chr=7; Num_of_Contigs=2; ) 		 
ISM2   ENSSSCG00000002405 7:108747789-108748322   CU468695,CH242-190O3,7:108739544-108748893
(Clone quality: bE190O3 on chr=7; Num_of_Contigs=13; )
ISOC1 ENSSSCG00000014258 2:119619441-119640124    
ISOC2   ENSSSCG00000003289 6:41279330-41287034    
ISPD   ENSSSCG00000015358 9:80206542-80291476    
ISX   ENSSSCG00000000153 5:8589693-8605681    
ITCH ENSSSCG00000007280 17:39946589-40001608    
ITFG1 ENSSSCG00000002845 6:25200040-25233600    
ITFG2   ENSSSCG00000000742 5:63168935-63181278   CU856242,CH242-195D5,5:63164130-63204612
(Clone quality: bE195D5 on chr=5; Num_of_Contigs=10; )
ITFG3   ENSSSCG00000007980 3:35299116-35324438   FP102907,CH242-215K19,3:35270245-35325917
(Clone quality: bE215K19 on chr=3; Num_of_Contigs=7; )
ITGA1 ENSSSCG00000016885 16:29202547-29281645    
ITGA10 ENSSSCG00000006687 4:103508072-103523538    
ITGA11 ENSSSCG00000004961 1:173488393-173570628    
ITGA2 ENSSSCG00000016887 16:29427892-29498935   CU928375,CH242-425K19,16:29401619-29534620
(Clone quality: bE425K19 on chr=16; Num_of_Contigs=1; )
ITGA2B ENSSSCG00000017357 12:16827361-16844026   CU468984,CH242-216D12,12:16822598-16850151
(Clone quality: bE216D12 on chr=12; Num_of_Contigs=22; )
ITGA3 ENSSSCG00000017578 12:24655910-24790905    
ITGA4 ENSSSCG00000016009 15:81544892-81624138   CU861559,CH242-348D16,15:81514178-81645419
(Clone quality: bE348D16 on chr=15; Num_of_Contigs=3; )
ITGA5 ENSSSCG00000000293 5:18143068-18165627   CU466514,CH242-63P24,5:18141753-18189023
(Clone quality: bE63P24 on chr=5; Num_of_Contigs=10; )
ITGA6 ENSSSCG00000015956 15:73539973-73558277    
ITGA7 ENSSSCG00000000358 5:20034034-20055068    
ITGA8 ENSSSCG00000011046 10:44061783-44230707    
ITGA9 ENSSSCG00000011245 13:18673363-18695927   FP102095,CH242-74C5,13:18616749-18696985
(Clone quality: bE74C5 on chr=13; Num_of_Contigs=6; )
ITGAE ENSSSCG00000017869 12:47092987-47136476    
ITGAL ENSSSCG00000007797 3:16488603-16527995    
ITGAV ENSSSCG00000016028 15:85848327-85873961    
ITGB1 ENSSSCG00000011101 10:53172192-53224433   CU570933,CH242-23K17,10:53090393-53282217
(Clone quality: bE23K17 on chr=10; Num_of_Contigs=1; )
ITGB3 ENSSSCG00000017306 12:14440438-14498372    
ITGB4 ENSSSCG00000017204 12:4001967-4036159    
ITGB5 ENSSSCG00000011863 13:101914435-101965525    
ITGB7 ENSSSCG00000000257 5:16877596-16884453    
ITGB8 ENSSSCG00000015375 9:83925614-83995388    
ITGBL1 ENSSSCG00000009526 11:70935096-71046518    
ITIH1 ENSSSCG00000011450 13:29488889-29502919   CU466500,CH242-511E20,13:29487518-29519739
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITIH2   ENSSSCG00000011128 10:59995273-60014981   CU464012,CH242-396O11,10:59995272-60031876
(Clone quality: bE396O11 on chr=10; Num_of_Contigs=7; )
ITIH3 ENSSSCG00000011451 13:29507641-29521520    
ITIH4 ENSSSCG00000011453 13:29598798-29610281   CU466500,CH242-511E20,13:29591579-29610349
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITIH5   ENSSSCG00000011129 10:60032080-60101959    
ITIH5L   ENSSSCG00000012339 X:47139469-47144251   FP091239,CH242-6G17,X:47138888-47144420
(Clone quality: bE6G17 on chr=X; Num_of_Contigs=4; )
ITK ENSSSCG00000017056 16:63700769-63768800    
ITLN2 ENSSSCG00000006373 4:93058605-93086827    
ITM2A   ENSSSCG00000012448 X:63094445-63101440   CU302273,CH242-384E8,X:63075697-63129808
(Clone quality: bE384E8 on chr=X; Num_of_Contigs=3; )
ITM2B ENSSSCG00000009403 11:18926256-18955058    
ITM2C ENSSSCG00000016267 15:124040914-124054783   CU571100,CH242-126N17,15:123990604-124093801
(Clone quality: bE126N17 on chr=15; Num_of_Contigs=2; )
ITM2C ENSSSCG00000016267 15:124040914-124054783   CU571100,CH242-126N17,15:123990604-124093801
(Clone quality: bE126N17 on chr=15; Num_of_Contigs=2; )
ITPA   ENSSSCG00000007158 17:34041420-34054746    
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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