A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
ECHDC3   ENSSSCG00000011119 10:57113207-57131105   FP089677,CH242-211O11,10:57088587-57186871
(Clone quality: bE211O11 on chr=10; Num_of_Contigs=4; )
ECHS1   ENSSSCG00000010790 14:148480842-148492810    
ECSIT ENSSSCG00000013615 2:52235699-52239569   CU855518,CH242-272A5,2:52231802-52278022
(Clone quality: bE272A5 on chr=2; Num_of_Contigs=10; )
ECSM3 ENSSSCG00000007116 17:31744235-31746961   CU606974,CH242-23K16,17:31739767-31793889
(Clone quality: bE23K16 on chr=17; Num_of_Contigs=5; )
ECT2 ENSSSCG00000015497 9:109041706-109069555   FP102036,CH242-81O13,9:109027561-109077593
(Clone quality: bE81O13 on chr=9; Num_of_Contigs=6; )
EDA ENSSSCG00000008134 3:42705588-42727070    
EDA ENSSSCG00000012385 X:55149305-55253415    
EDA location ⇒ X:55146326-55145810   CU694546,CH242-145J20,X:55121732-55184251
(Clone quality: bE145J20 on chr=X; Num_of_Contigs=2; )
EDAR ENSSSCG00000008134 3:42705588-42727070    
EDAR ENSSSCG00000010147 14:56133529-56133816   CU406971,CH242-320A14,14:56012844-56141165
(Clone quality: bE320A14 on chr=14; Num_of_Contigs=6; )
EDARADD   ENSSSCG00000010147 14:56133529-56133816   CU406971,CH242-320A14,14:56012844-56141165
(Clone quality: bE320A14 on chr=14; Num_of_Contigs=6; )
EDC3   ENSSSCG00000001903 7:64329125-64393560    
EDC4   ENSSSCG00000002771 6:12916884-12928680   FP102672,CH242-302K22,6:12916830-12941721
(Clone quality: bE302K22 on chr=6; Num_of_Contigs=5; )
EDEM1 ENSSSCG00000011536 13:51483236-51489878    
EDEM3   ENSSSCG00000015566 9:118256660-118356246    
EDF1   ENSSSCG00000005833 1:294159168-294162153    
EDG1 ENSSSCG00000017336 12:16133855-16134901   FP067380,CH242-32K16,12:15988019-16156790
(Clone quality: bE32K16 on chr=12; Num_of_Contigs=1; )
EDG1 location ⇒ 14:757803-757880   CT956048,CH242-518K8,14:639903-779667
(Clone quality: bE518K8 on chr=14; Num_of_Contigs=2; )
EDG2 location ⇒ 1:264647444-264647604   FP089497,CH242-330F21,1:264638706-264649119
(Clone quality: bE330F21 on chr=1; Num_of_Contigs=5; )
EDG2 location ⇒ 1:264774058-264773539   FP089497,CH242-330F21,1:264770964-264791359
(Clone quality: bE330F21 on chr=1; Num_of_Contigs=5; )
EDG2 location ⇒ 1:264807503-264807343   CU062597,CH242-77K2,1:264802472-264870828
(Clone quality: bE77K2 on chr=1; Num_of_Contigs=5; )
EDG3 location ⇒ 14:757151-758127   CT956048,CH242-518K8,14:639903-779667
(Clone quality: bE518K8 on chr=14; Num_of_Contigs=2; )
EDG6 ENSSSCG00000013474 2:47748809-47749966   FP016150,CH242-470H23,2:47737511-47776868
(Clone quality: bE470H23 on chr=2; Num_of_Contigs=9; )
EDG6 location ⇒ 2:47748789-47748905   FP016150,CH242-470H23,2:47737511-47776868
(Clone quality: bE470H23 on chr=2; Num_of_Contigs=9; )
EDG6 location ⇒ 2:47748967-47749043   FP016150,CH242-470H23,2:47737511-47776868
(Clone quality: bE470H23 on chr=2; Num_of_Contigs=9; )
EDIL3 ENSSSCG00000014138 2:81533862-81658328    
EDIL3 location ⇒ 2:81893036-81893821   CU582831,CH242-131H5,2:81890801-81988043
(Clone quality: bE131H5 on chr=2; Num_of_Contigs=5; )
EDIL3 location ⇒ 2:82192007-82192792   FP245496,CH242-46L8,2:82191059-82193568
(Clone quality: bE46L8 on chr=2; Num_of_Contigs=9; )
EDN1 ENSSSCG00000001050 7:9074488-9080825   CT955989,CH242-270H7,7:9062940-9157686
(Clone quality: bE270H7 on chr=7; Num_of_Contigs=2; )
EDN1 location ⇒ 7:9076147-9076318   CT955989,CH242-270H7,7:9062940-9157686
(Clone quality: bE270H7 on chr=7; Num_of_Contigs=2; )
EDN1 location ⇒ 7:9077616-9077774   CT955989,CH242-270H7,7:9062940-9157686
(Clone quality: bE270H7 on chr=7; Num_of_Contigs=2; )
EDN1 location ⇒ 7:9079568-9080341   CT955989,CH242-270H7,7:9062940-9157686
(Clone quality: bE270H7 on chr=7; Num_of_Contigs=2; )
EDN1 location ⇒ 7:9080371-9080812   CT955989,CH242-270H7,7:9062940-9157686
(Clone quality: bE270H7 on chr=7; Num_of_Contigs=2; )
EDN3 ENSSSCG00000007527 17:62042683-62064643 CR956624,CH242-281E17,17:61970760-62124598
(No clone quality info on bE281E17) 		 
EDNRA ENSSSCG00000009031 8:70023927-70037685   CU856277,CH242-15J4,8:69987004-70038059
(Clone quality: bE15J4 on chr=8; Num_of_Contigs=13; )
EDNRA location ⇒ 8:70021872-70021795   CU856277,CH242-15J4,8:69987004-70038059
(Clone quality: bE15J4 on chr=8; Num_of_Contigs=13; )
EDNRA location ⇒ 8:70022113-70022057   CU856277,CH242-15J4,8:69987004-70038059
(Clone quality: bE15J4 on chr=8; Num_of_Contigs=13; )
EDNRA location ⇒ 8:70023812-70023731   CU856277,CH242-15J4,8:69987004-70038059
(Clone quality: bE15J4 on chr=8; Num_of_Contigs=13; )
EDNRA location ⇒ 8:70037679-70037478   CU856277,CH242-15J4,8:69987004-70038059
(Clone quality: bE15J4 on chr=8; Num_of_Contigs=13; )
EDNRB ENSSSCG00000009477 11:48956082-48982910   FP236279,CH242-15A15,11:48896567-49042344
(Clone quality: bE15A15 on chr=11; Num_of_Contigs=1; )
EEA1   ENSSSCG00000000912 5:84751747-84871487    
EED ENSSSCG00000014915 9:20412390-20440251   CU914737,CH242-142G5,9:20412188-20440329
(Clone quality: bE142G5 on chr=9; Num_of_Contigs=19; )
EEF1B2   ENSSSCG00000016128 15:102223292-102226921   CU672272,CH242-171L9,15:102200633-102228689
(Clone quality: bE171L9 on chr=15; Num_of_Contigs=5; )
EEF1D   ENSSSCG00000006954 4:135903789-135908620   CU927913,CH242-99E21,4:135897043-135908622
(Clone quality: bE99E21 on chr=4; Num_of_Contigs=20; )
EEF1E1   ENSSSCG00000001030 7:5434731-5452300   CU468194,CH242-137N2,7:5406502-5457212
(Clone quality: bE137N2 on chr=7; Num_of_Contigs=11; )
EEF2K   ENSSSCG00000007839 3:21628663-21665015    
EEFSEC   ENSSSCG00000011619 13:59574621-59650012    
EEPD1   ENSSSCG00000016660 18:37205321-37248454    
EF1G_PIG   ENSSSCG00000013064 2:7513823-7524030   FP102338,CH242-94E13,2:7490082-7534927
(Clone quality: bE94E13 on chr=2; Num_of_Contigs=10; )
EFCAB10   ENSSSCG00000015431 9:98511421-98530707   CU570719,CH242-196G19,9:98491626-98583151
(Clone quality: bE196G19 on chr=9; Num_of_Contigs=5; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-29

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team